Genome: Amphibacillus xylanus NBRC 15112 (NC_018704.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 310233-310336 (+)TPP310420-311245 (+)thiD

Phosphomethylpyrimidine kinase 		AXY_03080Operon

DOOR ID: 1164783		AXY_03080 (thiD),
AXY_03090 (thiM),
AXY_03100 (thiE)		 View Structure
2 395777-395878 (+)purine395972-397508 (+)guaA

GMP synthase [glutamine-hydrolyzing] (GMP synthetase) (Glutamine amidotransferase)		AXY_03930Operon

DOOR ID: 1164798		AXY_03890,
AXY_03900,
AXY_03910,
AXY_03920,
AXY_03930 (guaA)		 View Structure
3 401175-401276 (-)purine400484-401063 (-)xpt

Xanthine phosphoribosyltransferase (XPRTase) (2)		AXY_03960Operon

DOOR ID: 1164799		AXY_03950,
AXY_03960 (xpt)		 View Structure
4 433182-433282 (+)purine433401-434700 (+)AXY_04240

Putative transporter		AXY_04240Single gene

DOOR ID: 3943593		AXY_04240 View Structure
5 435314-435413 (+)purine435606-436098 (+)purE

N5-carboxyaminoimidazole ribonucleotide mutase (N5-CAIR mutase) (8) (5-(carboxyamino)imidazole ribonucleotide mutase)		AXY_04260Operon

DOOR ID: 1164806		AXY_04260 (purE),
AXY_04270 (purK),
AXY_04280 (purB),
AXY_04290 (purC),
AXY_04300 (purS),
AXY_04310 (purQ),
AXY_04320 (purL),
AXY_04330 (purF),
AXY_04340 (purM),
AXY_04350 (purN),
AXY_04360 (purH),
AXY_04370 (purD)		 View Structure
6 453149-453294 (-)glmS451289-453119 (-)glmS

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		AXY_04410Single gene

DOOR ID: 3943596		AXY_04410 (glmS) View Structure
7 500706-500804 (+)TPP500907-501594 (+)tenA

Aminopyrimidine aminohydrolase 		AXY_04970Operon

DOOR ID: 1164821		AXY_04970 (tenA),
AXY_04980,
AXY_04990,
AXY_05000		 View Structure
8 548958-549124 (+)ykoK549440-550802 (+)mgtE

Magnesium transporter MgtE		AXY_05430Single gene

DOOR ID: 3943636		AXY_05430 (mgtE) View Structure
9 606787-606862 (-)glycine606423-606696 (-)AXY_05900

AXY_05900Operon

DOOR ID: 1164834		AXY_05890,
AXY_05900		 View Structure
10 666067-666157 (+)c-di-GMP-I666486-667542 (-)AXY_06410

Uncharacterized protein		AXY_06410operon

DOOR ID: 1164844		AXY_06410,
AXY_06420,
AXY_06430		 View Structure
11 845854-845966 (+)SAM846058-847075 (+)AXY_08070

Methionine import ATP-binding protein MetN 		AXY_08070Operon

DOOR ID: 1164887		AXY_08070,
AXY_08080,
AXY_08090		 View Structure
12 898164-898300 (+)FMN898457-899036 (+)ribU

Riboflavin transporter		AXY_08570Single gene

DOOR ID: 3943755		AXY_08570 (ribU) View Structure
13 920933-921070 (-)FMN919760-920813 (-)ribG

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		AXY_08750Operon

DOOR ID: 1164904		AXY_08720 (ribH),
AXY_08730 (ribBA),
AXY_08740 (ribE),
AXY_08750 (ribG)		 View Structure
14 1060455-1060538 (+)c-di-GMP-II1060629-1061004 (+)AXY_10060

AXY_10060Operon

DOOR ID: 1164932		AXY_10060,
AXY_10070,
AXY_10080,
AXY_10090,
AXY_10100,
AXY_10110		 View Structure
15 1341682-1341866 (+)cobalamin1342063-1342285 (+)nrdH

Glutaredoxin-like protein NrdH		AXY_13060Operon

DOOR ID: 1164999		AXY_13060 (nrdH),
AXY_13070 (nrdI),
AXY_13080 (nrdE),
AXY_13090 (nrdF)		 View Structure
16 2073863-2073972 (-)SAM2072689-2073787 (-)AXY_19840

Cystathionine gamma-synthase/O-acetylhomoserine (Thiol)-lyase (9)		AXY_19840Operon

DOOR ID: 1165127		AXY_19830,
AXY_19840		 View Structure
17 2106655-2106763 (-)TPP2105931-2106507 (-)AXY_20120

Putative thiamine transporter		AXY_20120Single gene

DOOR ID: 3944190		AXY_20120 View Structure
18 2194816-2194917 (+)SAM2195006-2196686 (+)metY

O-acetylhomoserine (Thiol)-lyase (9)		AXY_20900Single gene

DOOR ID: 3944236		AXY_20900 (metY) View Structure
19 2249104-2249203 (-)purine2247133-2248915 (-)ade

Adenine deaminase (Adenase) (Adenine aminase) 		AXY_21320Single gene

DOOR ID: 3944257		AXY_21320 (ade) View Structure
20 2254577-2254679 (+)Nico2254749-2256582 (+)AXY_21370

Cation-transporting ATPase		AXY_21370Single gene

DOOR ID: 3944262		AXY_21370 View Structure
21 2258189-2258301 (+)TPP2258372-2258858 (+)AXY_21400

AXY_21400Single gene

DOOR ID: 3944265		AXY_21400 View Structure
22 2351530-2351656 (+)preQ1-II2351657-2352173 (+)AXY_22220

AXY_22220Single gene

DOOR ID: 3944303		AXY_22220 View Structure
23 2437998-2438108 (-)SAM2436870-2437896 (-)metN

Methionine import ATP-binding protein MetN 		AXY_22980Operon

DOOR ID: 1165181		AXY_22950,
AXY_22960 (metQ),
AXY_22970 (metI),
AXY_22980 (metN)		 View Structure
24 2461008-2461132 (-)cobalamin2458674-2460852 (-)nrdD

Anaerobic ribonucleoside-triphosphate reductase 		AXY_23180Operon

DOOR ID: 1165183		AXY_23170 (nrdG),
AXY_23180 (nrdD)		 View Structure