Genome: Blastococcus saxobsidens DD2 (NC_016943.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 3965-4080 (+)SAH4295-5255 (+)gndA

6-phosphogluconate dehydrogenase (Decarboxylating) (4)
BLASA_0004Operon

DOOR ID: 1228621
BLASA_0005 (recF),
BLASA_0004 (gndA),
BLASA_0003 (dnaN)
View Structure
2 109307-109418 (-)TPP107356-107983 (-)thiE2

Thiamine-phosphate synthase (TP synthase) (TPS) (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)
BLASA_0101Operon

DOOR ID: 1228642
BLASA_0102,
BLASA_0101 (thiE2),
BLASA_0100 (thiO),
BLASA_0099 (thiS),
BLASA_0098 (thiG),
BLASA_0097 (thiE)
View Structure
3 603033-603166 (+)SAM603178-604480 (+)thrC

L-threonine synthase
BLASA_0622Single gene

DOOR ID: 3445912
BLASA_0622 (thrC) View Structure
4 912822-912905 (-)c-di-GMP-II911043-912783 (-)BLASA_0944

BLASA_0944Operon

DOOR ID: 1228827
BLASA_0944,
BLASA_0945,
BLASA_0946,
BLASA_0947
View Structure
5 934142-934283 (-)cobalamin933086-934064 (-)BLASA_0968

ABC Fe3+ transporter substrate-binding protein
BLASA_0968Single gene

DOOR ID: 3446023
BLASA_0968 View Structure
6 1199573-1199707 (-)cobalamin1197465-1199520 (-)BLASA_1256

Cobaltochelatase subunit
BLASA_1256Operon

DOOR ID: 1228896
BLASA_1247 (cobA),
BLASA_1248 (cobD2),
BLASA_1249 (cbiG),
BLASA_1250 (cbiO),
BLASA_1251 (cbiQ),
BLASA_1252 (cbiN),
BLASA_1253 (cbiM),
BLASA_1254 (cobB),
BLASA_1255 (cobO),
BLASA_1256
View Structure
7 1209618-1209701 (+)cobalamin1209753-1213374 (+)cobN

Aerobic cobaltochelatase subunit cobN
BLASA_1266Single gene

DOOR ID: 3446122
BLASA_1266 (cobN) View Structure
8 1519447-1519512 (+)ykkC-III1519523-1519838 (+)sugE

BLASA_1579single gene

DOOR ID: 3446206
BLASA_1579 (sugE) View Structure
9 1879477-1879633 (+)ydaO-yuaA1879730-1880891 (+)envC

Protease with a role in cell division
BLASA_1965Operon

DOOR ID: 1229030
BLASA_1965 (envC),
BLASA_1966
View Structure
10 1914674-1914816 (+)ydaO-yuaA1914822-1915740 (+)BLASA_2001

BLASA_2001Operon

DOOR ID: 1229036
BLASA_1998,
BLASA_1999,
BLASA_2000,
BLASA_2001
View Structure
11 2019842-2020021 (+)ydaO-yuaA2020037-2021123 (+)BLASA_2120

Putative Cell wall-associated hydrolase
BLASA_2120Single gene

DOOR ID: 3446390
BLASA_2120 View Structure
12 2747465-2747614 (-)ydaO-yuaA2746265-2747081 (-)BLASA_2865

Peptidoglycan-binding coiled-coil domain protein
BLASA_2865Single gene

DOOR ID: 3446596
BLASA_2865 View Structure
13 2792298-2792450 (+)ydaO-yuaA2792518-2793754 (+)BLASA_2914

Putative NLP/P60 peptidase
BLASA_2914Single gene

DOOR ID: 3446610
BLASA_2914 View Structure
14 2882064-2882208 (-)ydaO-yuaA2880970-2881873 (-)BLASA_3013

BLASA_3013Single gene

DOOR ID: 3446645
BLASA_3013 View Structure
15 4585428-4585543 (+)SAM-IV4585585-4586878 (+)metC

O-acetylhomoserine/O-acetylserine sulfhydrylase (9)
BLASA_4766Operon

DOOR ID: 1229652
BLASA_4763,
BLASA_4765,
BLASA_4766 (metC),
BLASA_4767 (metX),
BLASA_4768
View Structure