Genome: Oligotropha carboxidovorans OM5 (NC_015684.1); Phylum: Alphaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 1136051-1136161 (-)TPP1134825-1135023 (-)thiS

Thiamine-biosynthesis protein ThiS

DOOR ID: 883458
OCA5_c10640 (thiS),
OCA5_c10650 (thiO1)
View Structure
2 1421652-1421866 (+)cobalamin1421976-1424340 (+)metE

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)
OCA5_c13230Single gene

DOOR ID: 3195636
OCA5_c13230 (metE) View Structure
3 2549363-2549618 (+)cobalamin2549790-2552040 (+)OCA5_c23710

TonB-dependent receptor protein
OCA5_c23710Single gene

DOOR ID: 3196064
OCA5_c23710 View Structure
4 2708165-2708278 (+)glycine2708411-2709560 (+)gcvT

Aminomethyltransferase GcvT (0)

DOOR ID: 883744
OCA5_c25490 (gcvT),
OCA5_c25500 (gcvH)
View Structure
5 2715969-2716030 (-)fluoride2715350-2715734 (-)crcB1

Putative fluoride ion transporter CrcB
OCA5_c25540Single gene

DOOR ID: 3196151
OCA5_c25540 (crcB1) View Structure
6 3363468-3363547 (-)sam-alpha3362190-3363399 (-)metX

Homoserine O-acetyltransferase (HAT) (1) (Homoserine transacetylase) (HTA)

DOOR ID: 883852
OCA5_c31770 (metX)
View Structure
7 3473200-3473279 (+)sam-alpha3473352-3474564 (+)metZ

O-succinylhomoserine sulfhydrylase (OSH sulfhydrylase) (OSHS sulfhydrylase)
OCA5_c32870Single gene

DOOR ID: 3196481
OCA5_c32870 (metZ) View Structure