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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
755988-756139
(-)
FMN
755228-755882 (-)
ribB
3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
EAE_03615
Single gene
DOOR ID:
3182233
EAE_03615
(ribB)
View Structure
2
1182162-1182343
(+)
ykoK
1182399-1183413 (+)
EAE_05755
MgtE integral membrane region
EAE_05755
Single gene
DOOR ID:
3182362
EAE_05755
View Structure
3
1601253-1601441
(+)
cobalamin
1601505-1603353 (+)
btuB
Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)
EAE_07685
Operon
DOOR ID:
875878
EAE_07685
(btuB)
,
EAE_07690
View Structure
4
1726649-1726773
(-)
TPP
1724663-1726559 (-)
EAE_08180
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
EAE_08180
Operon
DOOR ID:
875899
EAE_08155
(thiH)
,
EAE_08160
(thiG)
,
EAE_08165,
EAE_08170,
EAE_08175,
EAE_08180
View Structure
5
1768276-1768509
(-)
lysine
1766742-1768092 (-)
EAE_08340
Aspartokinase
EAE_08340
Single gene
DOOR ID:
3182568
EAE_08340
View Structure
6
1950273-1950317
(+)
mini-ykkC
1950330-1950648 (+)
EAE_09215
EAE_09215
Single gene
DOOR ID:
3182663
EAE_09215
View Structure
7
2050607-2050723
(+)
Mg sensor
2050822-2053531 (+)
EAE_09705
Magnesium-transporting ATPase MgtA
EAE_09705
Single gene
DOOR ID:
3182707
EAE_09705
View Structure
8
2380018-2380147
(-)
TPP
2379001-2379982 (-)
tbpA
Thiamine transporter substrate binding subunit
EAE_11120
Operon
DOOR ID:
876014
EAE_11110
(thiQ)
,
EAE_11115
(thiP)
,
EAE_11120
(tbpA)
View Structure
9
3113268-3113405
(+)
MOCO
3114405-3114918 (+)
EAE_14500
Molybdenum cofactor biosynthesis protein B
EAE_14500
Operon
DOOR ID:
876163
EAE_14495
(moaA)
,
EAE_14500,
EAE_14505,
EAE_14510,
EAE_14515
(moaE)
,
EAE_14520
View Structure
10
4178809-4178912
(+)
TPP
4178978-4179674 (+)
EAE_19500
Aminopyrimidine aminohydrolase
EAE_19500
Operon
DOOR ID:
876352
EAE_19500,
EAE_19505,
EAE_19510,
EAE_19515
View Structure
11
4199463-4199542
(-)
ZMP-ZTP
4198812-4199445 (-)
EAE_19590
Lysine exporter (LYSE/YGGA)
EAE_19590
Single gene
DOOR ID:
3183442
EAE_19590
View Structure
12
4814503-4814606
(+)
yybP-ykoY
4814713-4815280 (+)
EAE_22625
Putative manganese efflux pump MntP
EAE_22625
Single gene
DOOR ID:
3183674
EAE_22625
View Structure
13
5042536-5042632
(-)
TPP
5041727-5042501 (-)
EAE_23680
Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
EAE_23680
Operon
DOOR ID:
876522
EAE_23675,
EAE_23680
View Structure
Genome:
Enterobacter aerogenes KCTC 2190
(
NC_015663.1
);
Phylum:
Gammaproteobacteria
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thiamine diphosphate biosynthetic process [GO:0009229]";i:18;s:15:"View Structure ";}i:5;a:19:{i:0;i:5;i:1;s:11:"NC_015663.1";i:2;s:33:"Enterobacter aerogenes KCTC 2190 ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:15:"1768276-1768509";i:6;s:1:"-";i:7;s:6:"lysine";i:8;s:0:"";i:9;s:15:"1766742-1768092";i:10;s:1:"-";i:11;s:9:"EAE_08340";i:12;s:14:"Aspartokinase ";i:13;s:9:"EAE_08340";i:14;s:11:"Single gene";i:15;s:7:"3182568";i:16;s:9:"EAE_08340";i:17;s:105:"lysine biosynthetic process via diaminopimelate [GO:0009089]; threonine biosynthetic process [GO:0009088]";i:18;s:15:"View Structure ";}i:6;a:19:{i:0;i:6;i:1;s:11:"NC_015663.1";i:2;s:33:"Enterobacter aerogenes KCTC 2190 ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:15:"1950273-1950317";i:6;s:1:"+";i:7;s:9:"mini-ykkC";i:8;s:0:"";i:9;s:15:"1950330-1950648";i:10;s:1:"+";i:11;s:9:"EAE_09215";i:12;s:0:"";i:13;s:9:"EAE_09215";i:14;s:11:"Single gene";i:15;s:7:"3182663";i:16;s:9:"EAE_09215";i:17;s:0:"";i:18;s:15:"View Structure ";}i:7;a:19:{i:0;i:7;i:1;s:11:"NC_015663.1";i:2;s:33:"Enterobacter aerogenes KCTC 2190 ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:15:"2050607-2050723";i:6;s:1:"+";i:7;s:9:"Mg sensor";i:8;s:0:"";i:9;s:15:"2050822-2053531";i:10;s:1:"+";i:11;s:9:"EAE_09705";i:12;s:35:"Magnesium-transporting ATPase MgtA ";i:13;s:9:"EAE_09705";i:14;s:11:"Single gene";i:15;s:7:"3182707";i:16;s:9:"EAE_09705";i:17;s:0:"";i:18;s:15:"View Structure ";}i:8;a:19:{i:0;i:8;i:1;s:11:"NC_015663.1";i:2;s:33:"Enterobacter aerogenes KCTC 2190 ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:15:"2380018-2380147";i:6;s:1:"-";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:15:"2379001-2379982";i:10;s:1:"-";i:11;s:4:"tbpA";i:12;s:46:"Thiamine transporter substrate binding subunit";i:13;s:9:"EAE_11120";i:14;s:6:"Operon";i:15;s:6:"876014";i:16;s:47:"EAE_11110(thiQ);EAE_11115(thiP);EAE_11120(tbpA)";i:17;s:31:"thiamine transport [GO:0015888]";i:18;s:15:"View Structure ";}i:9;a:19:{i:0;i:9;i:1;s:11:"NC_015663.1";i:2;s:33:"Enterobacter aerogenes KCTC 2190 ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:15:"3113268-3113405";i:6;s:1:"+";i:7;s:4:"MOCO";i:8;s:0:"";i:9;s:15:"3114405-3114918";i:10;s:1:"+";i:11;s:9:"EAE_14500";i:12;s:42:"Molybdenum cofactor biosynthesis protein B";i:13;s:9:"EAE_14500";i:14;s:6:"Operon";i:15;s:6:"876163";i:16;s:71:"EAE_14495(moaA);EAE_14500;EAE_14505;EAE_14510;EAE_14515(moaE);EAE_14520";i:17;s:59:"Mo-molybdopterin cofactor biosynthetic process [GO:0006777]";i:18;s:15:"View Structure ";}i:10;a:19:{i:0;i:10;i:1;s:11:"NC_015663.1";i:2;s:33:"Enterobacter aerogenes KCTC 2190 ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:15:"4178809-4178912";i:6;s:1:"+";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:15:"4178978-4179674";i:10;s:1:"+";i:11;s:9:"EAE_19500";i:12;s:31:"Aminopyrimidine aminohydrolase ";i:13;s:9:"EAE_19500";i:14;s:6:"Operon";i:15;s:6:"876352";i:16;s:39:"EAE_19500;EAE_19505;EAE_19510;EAE_19515";i:17;s:98:"thiamine biosynthetic process [GO:0009228]; thiamine diphosphate biosynthetic process [GO:0009229]";i:18;s:15:"View Structure ";}i:11;a:19:{i:0;i:11;i:1;s:11:"NC_015663.1";i:2;s:33:"Enterobacter aerogenes KCTC 2190 ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:15:"4199463-4199542";i:6;s:1:"-";i:7;s:7:"ZMP-ZTP";i:8;s:0:"";i:9;s:15:"4198812-4199445";i:10;s:1:"-";i:11;s:9:"EAE_19590";i:12;s:27:"Lysine exporter (LYSE/YGGA)";i:13;s:9:"EAE_19590";i:14;s:11:"Single gene";i:15;s:7:"3183442";i:16;s:9:"EAE_19590";i:17;s:33:"amino acid transport [GO:0006865]";i:18;s:15:"View Structure ";}i:12;a:19:{i:0;i:12;i:1;s:11:"NC_015663.1";i:2;s:33:"Enterobacter aerogenes KCTC 2190 ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:15:"4814503-4814606";i:6;s:1:"+";i:7;s:9:"yybP-ykoY";i:8;s:0:"";i:9;s:15:"4814713-4815280";i:10;s:1:"+";i:11;s:9:"EAE_22625";i:12;s:35:"Putative manganese efflux pump MntP";i:13;s:9:"EAE_22625";i:14;s:11:"Single gene";i:15;s:7:"3183674";i:16;s:9:"EAE_22625";i:17;s:0:"";i:18;s:15:"View Structure ";}i:13;a:19:{i:0;i:13;i:1;s:11:"NC_015663.1";i:2;s:33:"Enterobacter aerogenes KCTC 2190 ";i:3;s:19:"Gammaproteobacteria";i:4;s:4:"1236";i:5;s:15:"5042536-5042632";i:6;s:1:"-";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:15:"5041727-5042501";i:10;s:1:"-";i:11;s:9:"EAE_23680";i:12;s:102:"Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)";i:13;s:9:"EAE_23680";i:14;s:6:"Operon";i:15;s:6:"876522";i:16;s:19:"EAE_23675;EAE_23680";i:17;s:98:"thiamine biosynthetic process [GO:0009228]; thiamine diphosphate biosynthetic process [GO:0009229]";i:18;s:15:"View Structure ";}}
