Genome: Burkholderia sp. CCGE1001 chromosome I (NC_015136.1); Phylum: Betaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 524824-524932 (+)ZMP-ZTP525098-526346 (+)BC1001_0475

Serine hydroxymethyltransferase (SHMT) (Serine methylase)
BC1001_0475Operon

DOOR ID: 808793
BC1001_0475,
BC1001_0476
View Structure
2 837953-838264 (+)cobalamin838351-840214 (+)BC1001_0755

TonB-dependent receptor
BC1001_0755Operon

DOOR ID: 808846
BC1001_0755,
BC1001_0756,
BC1001_0757,
BC1001_0758
View Structure
3 1180010-1180053 (+)mini-ykkC1180073-1180394 (+)BC1001_1052

BC1001_1052Single gene

DOOR ID: 3058313
BC1001_1052 View Structure
4 1533918-1534021 (-)fluoride1533462-1533843 (-)BC1001_1348

Putative fluoride ion transporter CrcB
BC1001_1348Operon

DOOR ID: 808958
BC1001_1347,
BC1001_1348
View Structure
5 2697218-2697336 (+)TPP2697466-2699398 (+)BC1001_2368

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
BC1001_2368Single gene

DOOR ID: 3058885
BC1001_2368 View Structure
6 3073355-3073526 (+)yybP-ykoY3073582-3074155 (+)BC1001_2694

BC1001_2694Single gene

DOOR ID: 3059034
BC1001_2694 View Structure
7 3379549-3379733 (-)FMN3378678-3379395 (-)BC1001_2969

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
BC1001_2969Single gene

DOOR ID: 3059163
BC1001_2969 View Structure
8 3649056-3649179 (-)TPP3647687-3648818 (-)BC1001_3214

FAD dependent oxidoreductase
BC1001_3214Operon

DOOR ID: 809319
BC1001_3213,
BC1001_3214
View Structure
9 3803888-3804026 (-)SAH3802433-3803855 (-)BC1001_3360

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
BC1001_3360Single gene

DOOR ID: 3059304
BC1001_3360 View Structure
10 3895278-3895454 (-)yybP-ykoY3894161-3895172 (-)BC1001_3448

Sodium/calcium exchanger membrane region
BC1001_3448Single gene

DOOR ID: 3059326
BC1001_3448 View Structure
11 3936952-3937052 (+)glycine3937327-3938446 (+)BC1001_3496

Aminomethyltransferase (0) (Glycine cleavage system T protein)
BC1001_3496Operon

DOOR ID: 809373
BC1001_3496,
BC1001_3497,
BC1001_3498
View Structure
12 3937095-3937248 (+)glycine3937327-3938446 (+)BC1001_3496

Aminomethyltransferase (0) (Glycine cleavage system T protein)
BC1001_3496Operon

DOOR ID: 809373
BC1001_3496,
BC1001_3497,
BC1001_3498
View Structure