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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
447617-447773
(-)
ykoK
445282-447064 (-)
BBPR_0363
Permease protein of ABC transporter system
BBPR_0363
Single gene
DOOR ID:
2969364
BBPR_0363
View Structure
2
610011-610119
(-)
TPP
606293-609050 (-)
thiE
Multifunctional fusion protein [Includes: Phosphomethylpyrimidine synthase (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)]
BBPR_0480
Operon
DOOR ID:
760132
BBPR_0479,
BBPR_0480
(thiE)
View Structure
3
841736-841888
(-)
FMN
841109-841730 (-)
BBPR_0677
Riboflavin transporter
BBPR_0677
Single gene
DOOR ID:
2969521
BBPR_0677
View Structure
4
2097649-2097747
(+)
TPP
2098016-2098211 (+)
thiS
ThiS protein
BBPR_1770
Single gene
DOOR ID:
2970015
BBPR_1770
(thiS)
View Structure
Genome:
Bifidobacterium bifidum PRL2010
(
NC_014638.1
);
Phylum:
Actinobacteria
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