Genome: Paenibacillus polymyxa SC2 (NC_014622.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 30264-30543 (+)ydaO-yuaA30814-31963 (+)PPSC2_c0028

PPSC2_c0028Single gene

DOOR ID: 2960250		PPSC2_c0028 View Structure
2 137059-137196 (-)ydaO-yuaA136552-137053 (-)PPSC2_c0108

PPSC2_c0108Operon

DOOR ID: 756443		PPSC2_c0106,
PPSC2_c0107,
PPSC2_c0108		 View Structure
3 488429-488543 (-)glycine488252-488366 (+)PPSC2_c0417

PPSC2_c0417Single gene

DOOR ID: 2960397		PPSC2_c0417 View Structure
4 507626-507707 (-)c-di-GMP-I502832-506444 (-)PPSC2_c0433

PPSC2_c0433single gene

DOOR ID: 2960404		PPSC2_c0433 View Structure
5 507748-507826 (-)c-di-GMP-I502832-506444 (-)PPSC2_c0433

PPSC2_c0433single gene

DOOR ID: 2960404		PPSC2_c0433 View Structure
6 535856-535965 (-)TPP534615-535659 (-)PPSC2_c0458

PPSC2_c0458Operon

DOOR ID: 756515		PPSC2_c0458,
PPSC2_c0459		 View Structure
7 891747-891858 (+)TPP892041-893856 (+)PPSC2_c0801

PPSC2_c0801Single gene

DOOR ID: 2960601		PPSC2_c0801 View Structure
8 947037-947138 (+)purine947286-947772 (+)PPSC2_c0849

PPSC2_c0849Operon

DOOR ID: 756586		PPSC2_c0848,
PPSC2_c0849,
PPSC2_c0850,
PPSC2_c0851		 View Structure
9 1027160-1027244 (-)ZMP-ZTP1026179-1027046 (-)PPSC2_c0936

PPSC2_c0936Operon

DOOR ID: 756604		PPSC2_c0935,
PPSC2_c0936		 View Structure
10 1059183-1059292 (+)TPP1059551-1060193 (+)PPSC2_c0965

PPSC2_c0965Operon

DOOR ID: 756610		PPSC2_c0965,
PPSC2_c0966,
PPSC2_c0967		 View Structure
11 1292337-1292380 (-)PreQ11291517-1292201 (-)PPSC2_c1147

PPSC2_c1147Operon

DOOR ID: 756645		PPSC2_c1145,
PPSC2_c1146,
PPSC2_c1147		 View Structure
12 1358460-1358541 (+)c-di-GMP-I1358554-1360156 (+)PPSC2_c1215

PPSC2_c1215operon

DOOR ID: 756657		PPSC2_c1215,
PPSC2_c1216		 View Structure
13 1443611-1443755 (-)FMN1442492-1443440 (-)PPSC2_c1298

PPSC2_c1298Single gene

DOOR ID: 2960815		PPSC2_c1298 View Structure
14 1470086-1470259 (+)ydaO-yuaA1470297-1470768 (+)PPSC2_c1327

PPSC2_c1327Single gene

DOOR ID: 2960833		PPSC2_c1327 View Structure
15 1520517-1520728 (+)cobalamin1520935-1521943 (+)PPSC2_c1379

PPSC2_c1379Operon

DOOR ID: 756685		PPSC2_c1379,
PPSC2_c1380,
PPSC2_c1381,
PPSC2_c1382,
PPSC2_c1383,
PPSC2_c1384,
PPSC2_c1385		 View Structure
16 1536506-1536551 (+)PreQ11536554-1537253 (+)PPSC2_c1391

PPSC2_c1391Single gene

DOOR ID: 2960862		PPSC2_c1391 View Structure
17 1647048-1647174 (+)SAM1647291-1648209 (+)PPSC2_c1513

PPSC2_c1513Single gene

DOOR ID: 2960907		PPSC2_c1513 View Structure
18 2699144-2699242 (+)ykkC-yxkD2699252-2699426 (+)PPSC2_c2597

PPSC2_c2597Single gene

DOOR ID: 2961400		PPSC2_c2597 View Structure
19 3043385-3043552 (-)ydaO-yuaA3042709-3043378 (-)PPSC2_c2866

PPSC2_c2866Single gene

DOOR ID: 2961528		PPSC2_c2866 View Structure
20 3080404-3080512 (-)TPP3079479-3080055 (-)PPSC2_c2899

PPSC2_c2899Operon

DOOR ID: 756997		PPSC2_c2895,
PPSC2_c2896,
PPSC2_c2897,
PPSC2_c2898,
PPSC2_c2899		 View Structure
21 3116009-3116109 (+)ykkC-yxkD3116194-3116533 (+)PPSC2_c2936

PPSC2_c2936Operon

DOOR ID: 757004		PPSC2_c2936,
PPSC2_c2937		 View Structure
22 3341744-3341916 (-)FMN3340748-3341414 (-)PPSC2_c3170

PPSC2_c3170Operon

DOOR ID: 757052		PPSC2_c3168,
PPSC2_c3169,
PPSC2_c3170		 View Structure
23 3439075-3439165 (-)yybP-ykoY3438219-3438909 (-)PPSC2_c3272

PPSC2_c3272Single gene

DOOR ID: 2961684		PPSC2_c3272 View Structure
24 4244777-4244856 (+)glycine4245043-4246144 (+)PPSC2_c4048

PPSC2_c4048Operon

DOOR ID: 757226		PPSC2_c4048,
PPSC2_c4049,
PPSC2_c4050		 View Structure
25 4244863-4244964 (+)glycine4245043-4246144 (+)PPSC2_c4048

PPSC2_c4048Operon

DOOR ID: 757226		PPSC2_c4048,
PPSC2_c4049,
PPSC2_c4050		 View Structure
26 4413334-4413429 (-)glycine4411768-4413220 (-)PPSC2_c4194

PPSC2_c4194Single gene

DOOR ID: 2962057		PPSC2_c4194 View Structure
27 4413441-4413525 (-)glycine4411768-4413220 (-)PPSC2_c4194

PPSC2_c4194Single gene

DOOR ID: 2962057		PPSC2_c4194 View Structure
28 4436631-4436732 (+)TPP4436866-4437556 (+)PPSC2_c4211

PPSC2_c4211Operon

DOOR ID: 757260		PPSC2_c4211,
PPSC2_c4212,
PPSC2_c4213,
PPSC2_c4214		 View Structure
29 4569031-4569183 (-)ydaO-yuaA4567281-4568622 (-)PPSC2_c4354

PPSC2_c4354Operon

DOOR ID: 757288		PPSC2_c4353,
PPSC2_c4354		 View Structure
30 4604021-4604159 (-)SAM4602852-4603884 (-)PPSC2_c4393

PPSC2_c4393Operon

DOOR ID: 757294		PPSC2_c4391,
PPSC2_c4392,
PPSC2_c4393		 View Structure
31 4768263-4768465 (+)lysine4768599-4770066 (+)PPSC2_c4559

PPSC2_c4559Single gene

DOOR ID: 2962210		PPSC2_c4559 View Structure
32 4985013-4985240 (-)glmS4982957-4984790 (-)PPSC2_c4725

PPSC2_c4725Single gene

DOOR ID: 2962275		PPSC2_c4725 View Structure
33 5256566-5256647 (-)ZMP-ZTP5255770-5256358 (-)PPSC2_c4971

PPSC2_c4971Single gene

DOOR ID: 2962352		PPSC2_c4971 View Structure
34 5333100-5333287 (-)cobalamin5332915-5333038 (-)PPSC2_c5051

PPSC2_c5051Single gene

DOOR ID: 2962390		PPSC2_c5051 View Structure
35 5361180-5361376 (+)cobalamin5361533-5363852 (+)PPSC2_c5080

PPSC2_c5080Single gene

DOOR ID: 2962401		PPSC2_c5080 View Structure
36 5438458-5438557 (-)purine5437210-5438389 (-)PPSC2_c5158

PPSC2_c5158Operon

DOOR ID: 757455		PPSC2_c5156,
PPSC2_c5157,
PPSC2_c5158		 View Structure
37 5565117-5565321 (-)cobalamin5563314-5564898 (-)PPSC2_c5277

PPSC2_c5277Operon

DOOR ID: 757480		PPSC2_c5273,
PPSC2_c5274,
PPSC2_c5275,
PPSC2_c5276,
PPSC2_c5277,
PPSC2_c5278		 View Structure
38 5568002-5568105 (-)purine5565926-5567234 (-)PPSC2_c5280

PPSC2_c5280Operon

DOOR ID: 757481		PPSC2_c5280,
PPSC2_c5281		 View Structure