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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
443549-443705
(-)
ykoK
443296-443467 (-)
BBIF_0372
BBIF_0372
Single gene
DOOR ID:
2957876
BBIF_0372
View Structure
2
622802-622910
(-)
TPP
619084-621841 (-)
thiE
Multifunctional fusion protein [Includes: Phosphomethylpyrimidine synthase (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)]
BBIF_0505
Operon
DOOR ID:
755222
BBIF_0504,
BBIF_0505
(thiE)
View Structure
3
855677-855829
(-)
FMN
855050-855671 (-)
BBIF_0699
Riboflavin transporter
BBIF_0699
Single gene
DOOR ID:
2958036
BBIF_0699
View Structure
4
2070719-2070817
(+)
TPP
2071085-2071280 (+)
thiS
ThiS protein
BBIF_1712
Single gene
DOOR ID:
2958536
BBIF_1712
(thiS)
View Structure
Genome:
Bifidobacterium bifidum S17
(
NC_014616.1
);
Phylum:
Actinobacteria
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