Genome: Clostridium cellulovorans 743B (NC_014393.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 177120-177218 (+)TPP177325-178015 (+)Clocel_0105

Proton-coupled thiamine transporter YuaJ		Clocel_0105Single gene

DOOR ID: 2923853		Clocel_0105 View Structure
2 238344-238435 (-)Nico235503-238236 (-)Clocel_0150

ATPase; P-type (Transporting); HAD superfamily; subfamily IC		Clocel_0150Single gene

DOOR ID: 2923881		Clocel_0150 View Structure
3 296693-296772 (+)c-di-GMP-I296828-299501 (+)Clocel_0212

Diguanylate cyclase/phosphodiesterase		Clocel_0212single gene

DOOR ID: 2923922		Clocel_0212 View Structure
4 406525-406583 (-)fluoride405164-406472 (-)Clocel_0314

Cl-channel voltage-gated family protein		Clocel_0314Single gene

DOOR ID: 2923977		Clocel_0314 View Structure
5 790589-790764 (+)lysine790979-792173 (+)Clocel_0634

Aspartokinase 		Clocel_0634Operon

DOOR ID: 738646		Clocel_0634,
Clocel_0635		 View Structure
6 857535-857634 (-)TPP857015-857216 (-)Clocel_0686

Thiamine biosynthesis protein ThiS		Clocel_0686Single gene

DOOR ID: 2924162		Clocel_0686 View Structure
7 1306215-1306317 (+)SAM1306577-1308293 (+)Clocel_1077

Clocel_1077Operon

DOOR ID: 738734		Clocel_1077,
Clocel_1078		 View Structure
8 1445086-1445176 (-)c-di-GMP-I1435503-1439397 (+)Clocel_1182

Uncharacterized protein		Clocel_1182single gene

DOOR ID: 2924390		Clocel_1182 View Structure
9 1474167-1474214 (+)PreQ11474266-1474749 (+)Clocel_1205

Clocel_1205Operon

DOOR ID: 738757		Clocel_1205,
Clocel_1206,
Clocel_1207		 View Structure
10 1703811-1703912 (+)purine1704013-1704589 (+)Clocel_1388

Xanthine phosphoribosyltransferase (XPRTase) (2)		Clocel_1388Operon

DOOR ID: 738798		Clocel_1388,
Clocel_1389		 View Structure
11 2492837-2492932 (-)glycine2492346-2492616 (-)Clocel_2088

Clocel_2088Operon

DOOR ID: 738919		Clocel_2087,
Clocel_2088		 View Structure
12 2557935-2558038 (-)SAM2556926-2557850 (-)Clocel_2149

Homoserine O-acetyltransferase (HAT) (1) (Homoserine transacetylase) (HTA)		Clocel_2149Single gene

DOOR ID: 2924803		Clocel_2149 View Structure
13 2644236-2644428 (-)cobalamin2642877-2643954 (-)Clocel_2230

Cobalt-precorrin-5B C(1)-methyltransferase (95) (Cobalt-precorrin-6A synthase)		Clocel_2230Operon

DOOR ID: 738945		Clocel_2226,
Clocel_2227,
Clocel_2228,
Clocel_2229,
Clocel_2230		 View Structure
14 2849858-2850218 (-)glmS2847986-2849816 (-)Clocel_2403

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		Clocel_2403Single gene

DOOR ID: 2924893		Clocel_2403 View Structure
15 3261782-3261885 (-)SAM3260740-3261697 (-)Clocel_2677

Methionine import ATP-binding protein MetN 		Clocel_2677Operon

DOOR ID: 739021		Clocel_2675,
Clocel_2676,
Clocel_2677		 View Structure
16 3445793-3445892 (+)TPP3445997-3447305 (+)Clocel_2812

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		Clocel_2812Single gene

DOOR ID: 2925084		Clocel_2812 View Structure
17 3496110-3496226 (-)FMN3494862-3495957 (-)Clocel_2846

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		Clocel_2846Operon

DOOR ID: 739051		Clocel_2843,
Clocel_2844,
Clocel_2845,
Clocel_2846		 View Structure
18 3551133-3551167 (-)PreQ13550373-3550676 (-)Clocel_2881

Phosphotransferase system lactose/cellobiose-specific IIB subunit		Clocel_2881Operon

DOOR ID: 739057		Clocel_2878,
Clocel_2879,
Clocel_2880,
Clocel_2881,
Clocel_2882		 View Structure
19 3649043-3649140 (-)purine3647244-3648702 (-)Clocel_2962

Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPD) (IMPDH) (05)		Clocel_2962Operon

DOOR ID: 739075		Clocel_2961,
Clocel_2962		 View Structure
20 3722218-3722334 (-)FMN3721527-3722121 (-)Clocel_3031

Riboflavin transporter		Clocel_3031Single gene

DOOR ID: 2925193		Clocel_3031 View Structure
21 3737059-3737158 (-)SAM3735806-3736982 (-)Clocel_3040

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		Clocel_3040Single gene

DOOR ID: 2925197		Clocel_3040 View Structure
22 3823466-3823644 (-)lysine3822493-3823381 (-)Clocel_3115

4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) 		Clocel_3115Single gene

DOOR ID: 2925228		Clocel_3115 View Structure
23 4011983-4012078 (+)ykkC-yxkD4012140-4012461 (+)Clocel_3262

Small multidrug resistance protein		Clocel_3262Single gene

DOOR ID: 2925299		Clocel_3262 View Structure
24 4014342-4014387 (+)ykkC-yxkD4014480-4015788 (+)Clocel_3265

Aminoglycoside phosphotransferase		Clocel_3265Single gene

DOOR ID: 2925302		Clocel_3265 View Structure
25 4112855-4112965 (-)TPP4111932-4112763 (-)Clocel_3360

Phosphomethylpyrimidine kinase 		Clocel_3360Single gene

DOOR ID: 2925363		Clocel_3360 View Structure
26 4251550-4251652 (+)SAM4251834-4252968 (+)Clocel_3476

Cys/Met metabolism pyridoxal-phosphate-dependent protein		Clocel_3476Single gene

DOOR ID: 2925412		Clocel_3476 View Structure
27 4381400-4381575 (+)lysine4381706-4383170 (+)Clocel_3614

Amino acid permease-associated region		Clocel_3614Single gene

DOOR ID: 2925445		Clocel_3614 View Structure
28 4441641-4441722 (-)ZMP-ZTP4441009-4441483 (-)Clocel_3661

Transposase IS200-family protein		Clocel_3661Single gene

DOOR ID: 2925465		Clocel_3661 View Structure
29 4452920-4453071 (-)glmS4451049-4452882 (-)Clocel_3669

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		Clocel_3669Single gene

DOOR ID: 2925469		Clocel_3669 View Structure
30 4634544-4634639 (-)ykkC-yxkD4633989-4634379 (-)Clocel_3849

Amino acid-binding ACT domain-containing protein		Clocel_3849Single gene

DOOR ID: 2925531		Clocel_3849 View Structure
31 4712048-4712239 (-)cobalamin4711357-4711927 (-)Clocel_3914

Adenosylcobinamide-phosphate guanylyltransferase (2)		Clocel_3914Operon

DOOR ID: 739248		Clocel_3913,
Clocel_3914		 View Structure
32 5055777-5055824 (-)PreQ15055063-5055501 (-)Clocel_4190

6-carboxy-5;6;7;8-tetrahydropterin synthase 		Clocel_4190Operon

DOOR ID: 739300		Clocel_4189,
Clocel_4190		 View Structure