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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
1073669-1073797
(+)
TPP
1073889-1076097 (+)
RB2501_08175
RB2501_08175
Single gene
DOOR ID:
2688436
RB2501_08175
View Structure
2
2841735-2841953
(-)
cobalamin
2839796-2841602 (-)
RB2501_00206
TonB-dependent receptor; putative
RB2501_00206
Single gene
DOOR ID:
2689135
RB2501_00206
View Structure
3
3178715-3178765
(-)
SAM-SAH
3177962-3178445 (+)
RB2501_01690
RB2501_01690
Operon
DOOR ID:
618431
RB2501_01685,
RB2501_01690,
RB2501_01695
View Structure
4
3485944-3486087
(-)
SAM
3482155-3485842 (-)
RB2501_03110
Methionine synthase (3) (5-methyltetrahydrofolate--homocysteine methyltransferase)
RB2501_03110
Operon
DOOR ID:
618495
RB2501_03105,
RB2501_03110
View Structure
5
3496821-3496955
(-)
SAM
3493304-3496757 (-)
RB2501_03150
Bifunctional aspartokinase I/homeserine dehydrogenase I
RB2501_03150
Operon
DOOR ID:
618497
RB2501_03140,
RB2501_03145,
RB2501_03150
View Structure
Genome:
Robiginitalea biformata HTCC2501
(
NC_013222.1
);
Phylum:
Bacteroidetes/Chlorobi group
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