Genome: Desulfovibrio magneticus RS-1 (NC_012796.1); Phylum: delta/epsilon subdivisions
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 873663-873736 (-)SAH871451-873509 (-)DMR_07830

Putative Fe hydrogenase
DMR_07830Operon

DOOR ID: 571772
DMR_07830,
DMR_07840,
DMR_07850
View Structure
2 1645738-1645820 (+)ZMP-ZTP1645855-1647115 (+)glyA

Serine hydroxymethyltransferase (SHMT) (Serine methylase)
DMR_14920Single gene

DOOR ID: 2595064
DMR_14920 (glyA) View Structure
3 1716330-1716515 (-)cobalamin1715322-1716225 (-)cbiK

Sirohydrochlorin cobaltochelatase
DMR_15530Operon

DOOR ID: 571906
DMR_15520,
DMR_15530 (cbiK)
View Structure
4 3288977-3289058 (-)c-di-GMP-I3288359-3288818 (-)DMR_29160

Cytochrome c family protein
DMR_29160operon

DOOR ID: 572198
DMR_29150,
DMR_29160
View Structure
5 3979075-3979228 (+)FMN3979342-3979987 (+)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
DMR_35270Single gene

DOOR ID: 2595941
DMR_35270 (ribB) View Structure
6 4339540-4339624 (-)c-di-GMP-I4337193-4337448 (-)DMR_38300

Uncharacterized protein
DMR_38300operon

DOOR ID: 572369
DMR_38290,
DMR_38300,
DMR_38310
View Structure
7 5024753-5024905 (+)cobalamin5025141-5027241 (+)nrdD

Anaerobic ribonucleoside-triphosphate reductase class III
DMR_44320Single gene

DOOR ID: 2596377
DMR_44320 (nrdD) View Structure
8 5075820-5075955 (+)ydaO-yuaA5076260-5078282 (+)DMR_44700

Hypothetical membrane protein
DMR_44700Single gene

DOOR ID: 2596395
DMR_44700 View Structure
9 5181156-5181242 (-)glycine5179365-5179662 (+)DMR_45710

DMR_45710Operon

DOOR ID: 572515
DMR_45700,
DMR_45710
View Structure