Genome: Clostridium botulinum Ba4 str. 657 (NC_012658.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 197921-198022 (+)SAM198101-199277 (+)metK_1

CLJ_B0212Single gene

DOOR ID: 2563926		CLJ_B0212 (metK_1) View Structure
2 212090-212206 (+)FMN212301-212895 (+)CLJ_B0223

CLJ_B0223Single gene

DOOR ID: 2563931		CLJ_B0223 View Structure
3 237881-238046 (+)ykoK238249-239515 (+)CLJ_B0251

CLJ_B0251Single gene

DOOR ID: 2563948		CLJ_B0251 View Structure
4 294383-294558 (+)lysine294687-296151 (+)CLJ_B0299

CLJ_B0299Single gene

DOOR ID: 2563973		CLJ_B0299 View Structure
5 366127-366228 (+)purine366404-367706 (+)CLJ_B0370

CLJ_B0370Operon

DOOR ID: 1182628		CLJ_B0371 (xpt_1),
CLJ_B0370		 View Structure
6 505178-505352 (+)lysine505513-507280 (+)CLJ_B0490

CLJ_B0490Single gene

DOOR ID: 2564058		CLJ_B0490 View Structure
7 545247-545350 (-)TPP544141-544942 (-)thiD_1

CLJ_B0523Single gene

DOOR ID: 2564076		CLJ_B0523 (thiD_1) View Structure
8 659787-659892 (+)TPP659947-660631 (+)CLJ_B0637

CLJ_B0637Single gene

DOOR ID: 2564139		CLJ_B0637 View Structure
9 873833-873933 (+)THF874028-874808 (+)CLJ_B0843

CLJ_B0843Single gene

DOOR ID: 2564256		CLJ_B0843 View Structure
10 982629-982810 (+)cobalamin982952-984434 (+)cobQ

Cobyric acid synthase		CLJ_B0964Operon

DOOR ID: 1182715		CLJ_B0964 (cobQ),
CLJ_B0965 (cobD)		 View Structure
11 1156318-1156420 (+)SAM1156524-1157481 (+)CLJ_B1133

CLJ_B1133Operon

DOOR ID: 1182747		CLJ_B1133,
CLJ_B1134,
CLJ_B1135		 View Structure
12 1332627-1332696 (+)glycine1332787-1333165 (+)grdX

CLJ_B1299Single gene

DOOR ID: 2564515		CLJ_B1299 (grdX) View Structure
13 1697106-1697152 (+)PreQ11697422-1698421 (+)CLJ_B1662

CLJ_B1662Operon

DOOR ID: 1182846		CLJ_B1662,
CLJ_B1663,
CLJ_B1664 (queD),
CLJ_B1665,
CLJ_B1666 (folE)		 View Structure
14 1768806-1768909 (+)SAM1769030-1769918 (+)metF

CLJ_B1732Single gene

DOOR ID: 2564687		CLJ_B1732 (metF) View Structure
15 2011668-2011726 (-)fluoride2010423-2011611 (-)CLJ_B2023

CLJ_B2023Single gene

DOOR ID: 2564783		CLJ_B2023 View Structure
16 2047172-2047277 (-)SAM2045767-2047048 (-)CLJ_B2062

CLJ_B2062Operon

DOOR ID: 1182912		CLJ_B2060 (metA),
CLJ_B2061 (hom_2),
CLJ_B2062		 View Structure
17 2199227-2199328 (-)purine2198095-2199160 (-)CLJ_B2210

CLJ_B2210Operon

DOOR ID: 1182945		CLJ_B2209,
CLJ_B2210		 View Structure
18 2394896-2394995 (-)purine2393426-2394770 (-)CLJ_B2396

CLJ_B2396Single gene

DOOR ID: 2564937		CLJ_B2396 View Structure
19 2469285-2469391 (-)TPP2469130-2469268 (-)CLJ_B2465

CLJ_B2465Single gene

DOOR ID: 2564978		CLJ_B2465 View Structure
20 2486145-2486240 (-)ykkC-yxkD2485380-2486088 (-)CLJ_B2492

CLJ_B2492Operon

DOOR ID: 1182990		CLJ_B2491,
CLJ_B2492		 View Structure
21 3055241-3055346 (-)ykkC-yxkD3054724-3055162 (-)CLJ_B3056

CLJ_B3056Single gene

DOOR ID: 2565192		CLJ_B3056 View Structure
22 3122807-3122925 (-)FMN3121487-3122585 (-)ribD

CLJ_B3120Operon

DOOR ID: 1183101		CLJ_B3119 (ribE),
CLJ_B3120 (ribD)		 View Structure
23 3129121-3129282 (-)ykoK3126107-3128753 (-)mgtA

CLJ_B3124Single gene

DOOR ID: 2565228		CLJ_B3124 (mgtA) View Structure
24 3137799-3137900 (-)purine3137227-3137707 (-)purE

CLJ_B3133Operon

DOOR ID: 1183103		CLJ_B3129 (purN),
CLJ_B3130 (purM),
CLJ_B3131 (purF_1),
CLJ_B3132 (purC),
CLJ_B3133 (purE)		 View Structure
25 3165147-3165246 (-)purine3163619-3165062 (-)CLJ_B3155

CLJ_B3155Single gene

DOOR ID: 2565235		CLJ_B3155 View Structure
26 3167420-3167509 (-)glycine3165650-3167003 (-)CLJ_B3157

CLJ_B3157Single gene

DOOR ID: 2565236		CLJ_B3157 View Structure
27 3180296-3180395 (-)TPP3178822-3180199 (-)purF_2

CLJ_B3166Single gene

DOOR ID: 2565241		CLJ_B3166 (purF_2) View Structure
28 3505853-3505943 (-)ZMP-ZTP3503306-3505535 (-)pfl

CLJ_B3488Single gene

DOOR ID: 2565354		CLJ_B3488 (pfl) View Structure
29 3578155-3578252 (-)purine3576612-3578067 (-)guaB

CLJ_B3576Operon

DOOR ID: 1183182		CLJ_B3575 (guaA),
CLJ_B3576 (guaB)		 View Structure
30 3634874-3635042 (-)lysine3633507-3634710 (-)lysC

CLJ_B3619Operon

DOOR ID: 1183188		CLJ_B3618 (lysA),
CLJ_B3619 (lysC)		 View Structure
31 3733767-3733877 (-)SAM3732304-3733630 (-)CLJ_B3706

CLJ_B3706Single gene

DOOR ID: 2565444		CLJ_B3706 View Structure
32 3743553-3743712 (-)glmS3741683-3743510 (-)glmS

CLJ_B3716Single gene

DOOR ID: 2565451		CLJ_B3716 (glmS) View Structure
33 3763467-3763593 (+)ydaO-yuaA3764285-3765149 (-)gidA_2

CLJ_B3741Operon

DOOR ID: 1183213		CLJ_B3741 (gidA_2) View Structure