Genome: Clostridium cellulolyticum H10 (NC_011898.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 101863-101963 (+)SAM102060-103251 (+)Ccel_0087

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		Ccel_0087Single gene

DOOR ID: 2485600		Ccel_0087 View Structure
2 597732-597876 (+)ydaO-yuaA598013-598868 (+)Ccel_0519

4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) 		Ccel_0519Single gene

DOOR ID: 2485753		Ccel_0519 View Structure
3 613188-613371 (-)lysine612213-613095 (-)Ccel_0526

4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) 		Ccel_0526Operon

DOOR ID: 517689		Ccel_0524,
Ccel_0525,
Ccel_0526		 View Structure
4 872452-872592 (+)ydaO-yuaA872592-873489 (+)Ccel_0747

NLP/P60 protein		Ccel_0747Single gene

DOOR ID: 2485842		Ccel_0747 View Structure
5 1290748-1290851 (+)Nico1290957-1293480 (+)Ccel_1038

ATPase; P-type (Transporting); HAD superfamily; subfamily IC		Ccel_1038Single gene

DOOR ID: 2485936		Ccel_1038 View Structure
6 1451256-1451350 (+)glycine1451500-1452652 (+)Ccel_1188

Aminotransferase class V		Ccel_1188Operon

DOOR ID: 517809		Ccel_1188,
Ccel_1189		 View Structure
7 1474087-1474267 (+)glmS1474519-1476346 (+)Ccel_1205

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		Ccel_1205Single gene

DOOR ID: 2485997		Ccel_1205 View Structure
8 1571160-1571375 (+)cobalamin1571540-1572287 (+)Ccel_1266

Cobalt transport protein CbiM (Energy-coupling factor transporter probable substrate-capture protein CbiM) (ECF transporter S component CbiM)		Ccel_1266Operon

DOOR ID: 517829		Ccel_1266,
Ccel_1267,
Ccel_1268,
Ccel_1269,
Ccel_1270,
Ccel_1271,
Ccel_1272,
Ccel_1273,
Ccel_1274,
Ccel_1275,
Ccel_1276,
Ccel_1277 (hemC),
Ccel_1278,
Ccel_1279,
Ccel_1280,
Ccel_1281,
Ccel_1282,
Ccel_1283,
Ccel_1284,
Ccel_1285,
Ccel_1286,
Ccel_1287,
Ccel_1288,
Ccel_1289 (mtnA),
Ccel_1290		 View Structure
9 1695232-1695339 (+)THF1695430-1695955 (+)Ccel_1395

Ccel_1395Single gene

DOOR ID: 2486057		Ccel_1395 View Structure
10 1707991-1708092 (+)purine1708270-1708843 (+)Ccel_1405

Xanthine phosphoribosyltransferase (XPRTase) (2)		Ccel_1405Operon

DOOR ID: 517854		Ccel_1405,
Ccel_1406		 View Structure
11 2317544-2317686 (-)ydaO-yuaA2316648-2317539 (-)Ccel_1956

NLP/P60 protein		Ccel_1956Single gene

DOOR ID: 2486251		Ccel_1956 View Structure
12 2359575-2359674 (-)TPP2358646-2359459 (-)Ccel_1992

Phosphomethylpyrimidine kinase		Ccel_1992Operon

DOOR ID: 517977		Ccel_1989,
Ccel_1990,
Ccel_1991,
Ccel_1992		 View Structure
13 2359770-2359867 (-)TPP2358646-2359459 (-)Ccel_1992

Phosphomethylpyrimidine kinase		Ccel_1992Operon

DOOR ID: 517977		Ccel_1989,
Ccel_1990,
Ccel_1991,
Ccel_1992		 View Structure
14 2365715-2365884 (-)ykoK2364564-2365497 (-)Ccel_2001

Mg2 transporter protein CorA family protein		Ccel_2001Single gene

DOOR ID: 2486272		Ccel_2001 View Structure
15 2369574-2369698 (-)FMN2368389-2369493 (-)Ccel_2006

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		Ccel_2006Operon

DOOR ID: 517979		Ccel_2003 (ribH),
Ccel_2004,
Ccel_2005,
Ccel_2006		 View Structure
16 2486248-2486358 (+)TPP2486446-2486992 (+)Ccel_2120

Proton-coupled thiamine transporter YuaJ		Ccel_2120Single gene

DOOR ID: 2486304		Ccel_2120 View Structure
17 2494668-2494838 (+)ydaO-yuaA2494839-2495547 (+)Ccel_2128

NLP/P60 protein		Ccel_2128Single gene

DOOR ID: 2486307		Ccel_2128 View Structure
18 2599825-2599904 (+)ZMP-ZTP2599993-2602222 (+)Ccel_2224

Formate acetyltransferase		Ccel_2224Single gene

DOOR ID: 2486348		Ccel_2224 View Structure
19 2951117-2951220 (+)ykkC-yxkD2951278-2951596 (+)Ccel_2446

Small multidrug resistance protein		Ccel_2446Single gene

DOOR ID: 2486426		Ccel_2446 View Structure
20 3739917-3740099 (-)cobalamin3738781-3739783 (-)Ccel_3204

Periplasmic binding protein		Ccel_3204Operon

DOOR ID: 518217		Ccel_3202,
Ccel_3203,
Ccel_3204		 View Structure
21 3959917-3960045 (+)FMN3960143-3960695 (+)Ccel_3408

Riboflavin transporter		Ccel_3408Single gene

DOOR ID: 2486768		Ccel_3408 View Structure