Genome: Methylobacterium nodulans ORS 2060 (NC_011894.1); Phylum: Alphaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 1396290-1396503 (+)cobalamin1396607-1397399 (+)Mnod_1320

Methyltransferase type 11
Mnod_1320Operon

DOOR ID: 516267
Mnod_1320,
Mnod_1321,
Mnod_1322,
Mnod_1323,
Mnod_1324
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2 1491833-1492027 (-)cobalamin1489456-1491574 (-)Mnod_1407

TonB-dependent siderophore receptor
Mnod_1407Operon

DOOR ID: 516282
Mnod_1406,
Mnod_1407
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3 2254142-2254341 (+)cobalamin2254371-2254548 (+)Mnod_2145

Cobalt transporter; subunit CbtB
Mnod_2145Single gene

DOOR ID: 2482272
Mnod_2145 View Structure
4 3239979-3240187 (+)cobalamin3240314-3242519 (+)Mnod_3135

TonB-dependent siderophore receptor
Mnod_3135Operon

DOOR ID: 516551
Mnod_3135,
Mnod_3136,
Mnod_3137,
Mnod_3138
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5 4584275-4584382 (+)TPP4584439-4586323 (+)Mnod_4530

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Mnod_4530Single gene

DOOR ID: 2483295
Mnod_4530 View Structure
6 4653669-4653735 (-)SAH4652441-4653185 (-)Mnod_4592

Acetoacetate decarboxylase
Mnod_4592Operon

DOOR ID: 516768
Mnod_4591,
Mnod_4592,
Mnod_4593
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7 6138778-6138880 (-)glycine6137584-6138727 (-)Mnod_6035

Glycine cleavage system T protein
Mnod_6035Operon

DOOR ID: 517006
Mnod_6033,
Mnod_6034,
Mnod_6035
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8 7608745-7608875 (-)TPP7607465-7608674 (-)Mnod_7518

Glycine oxidase ThiO
Mnod_7518Operon

DOOR ID: 517247
Mnod_7517,
Mnod_7518
View Structure