Genome: Bacillus cereus G9842 (NC_011772.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 157420-157575 (+)glmS157766-159569 (+)glmS

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		BCG9842_B5133Single gene

DOOR ID: 2460388		BCG9842_B5133 (glmS) View Structure
2 166853-166967 (-)SAM165953-166766 (-)BCG9842_B5126

Lipoprotein		BCG9842_B5126Operon

DOOR ID: 506431		BCG9842_B5128,
BCG9842_B5127,
BCG9842_B5126		 View Structure
3 175743-175848 (+)SAM175984-176902 (+)BCG9842_B5114

Oligopeptide ABC transporter; permease protein		BCG9842_B5114Operon

DOOR ID: 506433		BCG9842_B5114,
BCG9842_B5113,
BCG9842_B5112,
BCG9842_B5111,
BCG9842_B5110		 View Structure
4 186015-186119 (-)SAM184241-185882 (-)BCG9842_B5106

Putative oligopeptide ABC transporter; oligopeptide-binding protein		BCG9842_B5106Single gene

DOOR ID: 2460401		BCG9842_B5106 View Structure
5 251172-251273 (+)purine251437-252976 (+)guaA

GMP synthase [glutamine-hydrolyzing] (GMP synthetase) (Glutamine amidotransferase)		BCG9842_B5024Single gene

DOOR ID: 2460429		BCG9842_B5024 (guaA) View Structure
6 253132-253233 (+)purine253362-254688 (+)BCG9842_B5022

Xanthine/uracil permease family protein		BCG9842_B5022Single gene

DOOR ID: 2460430		BCG9842_B5022 View Structure
7 295078-295179 (+)purine295289-295775 (+)purE

N5-carboxyaminoimidazole ribonucleotide mutase (N5-CAIR mutase) (8) (5-(carboxyamino)imidazole ribonucleotide mutase)		BCG9842_B4986Operon

DOOR ID: 506448		BCG9842_B4986 (purE),
BCG9842_B4985 (purK),
BCG9842_B4984 (purB_2),
BCG9842_B4983 (purC),
BCG9842_B4982,
BCG9842_B4981 (purQ),
BCG9842_B4980 (purL),
BCG9842_B4979 (purF),
BCG9842_B4978 (purM),
BCG9842_B4977 (purN),
BCG9842_B4976 (purH)		 View Structure
8 320103-320208 (+)SAM320331-321351 (+)BCG9842_B4962

Methionine import ATP-binding protein MetN 		BCG9842_B4962Operon

DOOR ID: 506451		BCG9842_B4962,
BCG9842_B4961,
BCG9842_B4960		 View Structure
9 342276-342377 (-)purine340876-342073 (-)BCG9842_B4940

Nucleoside transporter; NupC family		BCG9842_B4940Single gene

DOOR ID: 2460454		BCG9842_B4940 View Structure
10 371234-371346 (-)SAM370515-371148 (-)BCG9842_B4910

Putative cyclase		BCG9842_B4910Single gene

DOOR ID: 2460469		BCG9842_B4910 View Structure
11 401115-401227 (+)TPP401299-402109 (+)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)		BCG9842_B4885Operon

DOOR ID: 506464		BCG9842_B4885 (thiM),
BCG9842_B4884 (thiE)		 View Structure
12 404495-404579 (+)c-di-GMP-I404713-406456 (+)BCG9842_B4882

Methyl-accepting chemotaxis protein		BCG9842_B4882single gene

DOOR ID: 2460485		BCG9842_B4882 View Structure
13 410226-410327 (+)TPP410428-410749 (+)BCG9842_B4879

BCG9842_B4879Operon

DOOR ID: 506465		BCG9842_B4879,
BCG9842_B4878,
BCG9842_B4877,
BCG9842_B4876		 View Structure
14 730246-730357 (+)TPP730602-731298 (+)BCG9842_B4549

Aminopyrimidine aminohydrolase 		BCG9842_B4549Operon

DOOR ID: 506516		BCG9842_B4549,
BCG9842_B4548,
BCG9842_B4547,
BCG9842_B4546,
BCG9842_B4545 (tenI),
BCG9842_B4544 (thiO),
BCG9842_B4543 (thiS),
BCG9842_B4542 (thiG),
BCG9842_B4541,
BCG9842_B4540 (thiD1)		 View Structure
15 730418-730520 (+)TPP730602-731298 (+)BCG9842_B4549

Aminopyrimidine aminohydrolase 		BCG9842_B4549Operon

DOOR ID: 506516		BCG9842_B4549,
BCG9842_B4548,
BCG9842_B4547,
BCG9842_B4546,
BCG9842_B4545 (tenI),
BCG9842_B4544 (thiO),
BCG9842_B4543 (thiS),
BCG9842_B4542 (thiG),
BCG9842_B4541,
BCG9842_B4540 (thiD1)		 View Structure
16 738417-738564 (+)ydaO-yuaA738657-739044 (+)BCG9842_B4538

BCG9842_B4538Operon

DOOR ID: 506517		BCG9842_B4538,
BCG9842_B4537		 View Structure
17 739552-739697 (+)ydaO-yuaA739760-739901 (+)BCG9842_B4535

BCG9842_B4535Single gene

DOOR ID: 2460632		BCG9842_B4535 View Structure
18 824773-824954 (-)lysine823200-824625 (-)BCG9842_B4436

Amino acid permease family protein		BCG9842_B4436Operon

DOOR ID: 506541		BCG9842_B4437,
BCG9842_B4436		 View Structure
19 1039145-1039237 (+)c-di-GMP-I1039296-1045836 (+)BCG9842_B4210

Collagen adhesion protein		BCG9842_B4210single gene

DOOR ID: 2460799		BCG9842_B4210 View Structure
20 1264079-1264252 (-)yybP-ykoY1263201-1263996 (-)BCG9842_B3984

Membrane protein; TerC family		BCG9842_B3984Single gene

DOOR ID: 2460915		BCG9842_B3984 View Structure
21 1294157-1294200 (+)PreQ11294293-1294956 (+)BCG9842_B3949

7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)		BCG9842_B3949Operon

DOOR ID: 506625		BCG9842_B3949,
BCG9842_B3948,
BCG9842_B3947,
BCG9842_B3946 (queF)		 View Structure
22 1355449-1355630 (+)lysine1355810-1357127 (+)lysA

Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (0)		BCG9842_B3871Single gene

DOOR ID: 2460970		BCG9842_B3871 (lysA) View Structure
23 1357242-1357350 (+)SAM1357422-1357566 (+)BCG9842_B3869

BCG9842_B3869Single gene

DOOR ID: 2460971		BCG9842_B3869 View Structure
24 1370104-1370209 (+)SAM1370303-1371620 (+)BCG9842_B3854

Na+/H+ antiporter family protein		BCG9842_B3854Single gene

DOOR ID: 2460977		BCG9842_B3854 View Structure
25 1415195-1415334 (+)FMN1415496-1416075 (+)BCG9842_B3808

Riboflavin transporter		BCG9842_B3808Single gene

DOOR ID: 2461006		BCG9842_B3808 View Structure
26 1490418-1490519 (+)purine1490624-1491218 (+)xpt

Xanthine phosphoribosyltransferase (XPRTase) (2)		BCG9842_B3719Operon

DOOR ID: 506661		BCG9842_B3719 (xpt),
BCG9842_B3718 (pbuX)		 View Structure
27 1503099-1503262 (+)ykoK1503599-1504325 (+)BCG9842_B3703

Putative cation transporter		BCG9842_B3703Single gene

DOOR ID: 2461045		BCG9842_B3703 View Structure
28 1535079-1535123 (+)PreQ11535129-1535615 (+)BCG9842_B3683

BCG9842_B3683Single gene

DOOR ID: 2461053		BCG9842_B3683 View Structure
29 1682496-1682682 (-)lysine1681063-1682293 (-)dapG1

Aspartokinase 		BCG9842_B3521Single gene

DOOR ID: 2461120		BCG9842_B3521 (dapG1) View Structure
30 1739708-1739854 (+)ydaO-yuaA1739998-1741825 (+)BCG9842_B3464

Putative membrane protein		BCG9842_B3464Single gene

DOOR ID: 2461152		BCG9842_B3464 View Structure
31 2210461-2210580 (-)glycine2208984-2210352 (-)BCG9842_B2979

Sodium/alanine symporter family protein		BCG9842_B2979Single gene

DOOR ID: 2461387		BCG9842_B2979 View Structure
32 2468996-2469101 (+)TPP2469228-2469918 (+)tenA

Aminopyrimidine aminohydrolase 		BCG9842_B2739Single gene

DOOR ID: 2461540		BCG9842_B2739 (tenA) View Structure
33 2536321-2536436 (+)SAM2536576-2537125 (+)BCG9842_B2659

BCG9842_B2659Operon

DOOR ID: 506836		BCG9842_B2659,
BCG9842_B2658,
BCG9842_B2657		 View Structure
34 2971469-2971660 (+)lysine2971772-2973239 (+)lysP

Lysine-specific permease		BCG9842_B2176Single gene

DOOR ID: 2461821		BCG9842_B2176 (lysP) View Structure
35 3107155-3107256 (-)SAM3105860-3107066 (-)BCG9842_B2041

Peptidase M20 domain-containing protein 2		BCG9842_B2041Single gene

DOOR ID: 2461900		BCG9842_B2041 View Structure
36 3221207-3221305 (-)SAM3220848-3221106 (-)BCG9842_B1919

BCG9842_B1919Single gene

DOOR ID: 2461963		BCG9842_B1919 View Structure
37 3234091-3234194 (-)purine3233031-3233910 (-)BCG9842_B1905

Purine or other phosphorylase family 1		BCG9842_B1905Single gene

DOOR ID: 2461971		BCG9842_B1905 View Structure
38 3262811-3262954 (+)ydaO-yuaA3263051-3263195 (+)BCG9842_B1867

BCG9842_B1867Single gene

DOOR ID: 2461992		BCG9842_B1867 View Structure
39 3733666-3733767 (-)purine3732706-3733432 (-)BCG9842_B1408

Transcriptional regulator; GntR family		BCG9842_B1408Single gene

DOOR ID: 2462243		BCG9842_B1408 View Structure
40 3986576-3986764 (+)cobalamin3986891-3989180 (+)metE

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		BCG9842_B1131Single gene

DOOR ID: 2462338		BCG9842_B1131 (metE) View Structure
41 4017329-4017470 (-)SAM4016056-4017238 (-)mtnK

Methylthioribose kinase (MTR kinase) (00)		BCG9842_B1098Operon

DOOR ID: 507115		BCG9842_B1099 (mtnA),
BCG9842_B1098 (mtnK)		 View Structure
42 4019663-4019768 (+)SAM4019832-4021077 (+)mtnW

2;3-diketo-5-methylthiopentyl-1-phosphate enolase (DK-MTP-1-P enolase) (RuBisCO-like protein) (RLP)		BCG9842_B1093Operon

DOOR ID: 507116		BCG9842_B1093 (mtnW),
BCG9842_B1092 (mtnX),
BCG9842_B1091 (mtnB),
BCG9842_B1090		 View Structure
43 4083457-4083600 (+)FMN4083905-4085018 (+)ribD

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		BCG9842_B1017Operon

DOOR ID: 507126		BCG9842_B1017 (ribD),
BCG9842_B1016 (ribE),
BCG9842_B1015 (ribBA),
BCG9842_B1014 (ribH)		 View Structure
44 4113904-4114071 (+)ykoK4114406-4117112 (+)mgtA

Magnesium-translocating P-type ATPase 		BCG9842_B0981Single gene

DOOR ID: 2462414		BCG9842_B0981 (mgtA) View Structure
45 4209856-4209965 (-)SAM4207952-4209785 (-)BCG9842_B0867

Homocysteine S-methyltransferase domain protein/methylenetetrahydrofolate reductase family protein		BCG9842_B0867Operon

DOOR ID: 507152		BCG9842_B0869 (murG2),
BCG9842_B0868 (metH),
BCG9842_B0867		 View Structure
46 4210169-4210279 (+)SAM4210373-4211486 (+)metI

Cystathionine gamma-synthase/O-acetylhomoserine thiolyase		BCG9842_B0864Operon

DOOR ID: 507153		BCG9842_B0864 (metI),
BCG9842_B0863		 View Structure
47 4682809-4682930 (-)SAM4681439-4682639 (-)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		BCG9842_B0363Single gene

DOOR ID: 2462686		BCG9842_B0363 (metK) View Structure
48 4695304-4695392 (-)c-di-GMP-I4692565-4695151 (-)BCG9842_B0348

Uncharacterized protein		BCG9842_B0348operon

DOOR ID: 507261		BCG9842_B0351,
BCG9842_B0350,
BCG9842_B0349,
BCG9842_B0348		 View Structure
49 4695460-4695548 (-)c-di-GMP-I4692565-4695151 (-)BCG9842_B0348

Uncharacterized protein		BCG9842_B0348operon

DOOR ID: 507261		BCG9842_B0351,
BCG9842_B0350,
BCG9842_B0349,
BCG9842_B0348		 View Structure
50 4695617-4695705 (-)c-di-GMP-I4692565-4695151 (-)BCG9842_B0348

Uncharacterized protein		BCG9842_B0348operon

DOOR ID: 507261		BCG9842_B0351,
BCG9842_B0350,
BCG9842_B0349,
BCG9842_B0348		 View Structure
51 4730702-4730803 (+)TPP4730888-4731560 (+)BCG9842_B0304

Probable proton-coupled thiamine transporter YuaJ		BCG9842_B0304Single gene

DOOR ID: 2462714		BCG9842_B0304 View Structure
52 4892768-4892875 (-)SAM4891560-4892586 (-)BCG9842_B0111

Methionine import ATP-binding protein MetN 		BCG9842_B0111Operon

DOOR ID: 507304		BCG9842_B0114,
BCG9842_B0113,
BCG9842_B0112,
BCG9842_B0111		 View Structure
53 4973458-4973517 (+)fluoride4973541-4973976 (+)BCG9842_B0028

Putative fluoride ion transporter CrcB		BCG9842_B0028Operon

DOOR ID: 507322		BCG9842_B0028,
BCG9842_B0027		 View Structure
54 5093064-5093179 (-)TPP5091190-5092951 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		BCG9842_B5612Single gene

DOOR ID: 2462892		BCG9842_B5612 (thiC) View Structure
55 5283424-5283528 (-)SAM5282032-5283331 (-)BCG9842_B5422

O-acetylhomoserine/O-acetylserine sulfhydrylase		BCG9842_B5422Operon

DOOR ID: 507381		BCG9842_B5423 (metA),
BCG9842_B5422		 View Structure