Genome: Anoxybacillus flavithermus WK1 (NC_011567.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 156745-156916 (+)glmS156978-158781 (+)glmS

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
Aflv_0152Single gene

DOOR ID: 2411261
Aflv_0152 (glmS) View Structure
2 242187-242288 (+)purine242368-243904 (+)guaA

GMP synthase [glutamine-hydrolyzing] (GMP synthetase) (Glutamine amidotransferase)
Aflv_0225Single gene

DOOR ID: 2411280
Aflv_0225 (guaA) View Structure
3 251859-251960 (+)purine252067-252556 (+)purE

N5-carboxyaminoimidazole ribonucleotide mutase (N5-CAIR mutase) (8) (5-(carboxyamino)imidazole ribonucleotide mutase)
Aflv_0228Operon

DOOR ID: 483256
Aflv_0228 (purE),
Aflv_0229 (purK),
Aflv_0230 (purB),
Aflv_0231 (purC),
Aflv_0232 (purS),
Aflv_0233 (purQ),
Aflv_0234 (purL),
Aflv_0235 (purF),
Aflv_0236 (purM),
Aflv_0237 (purN),
Aflv_0238 (purH),
Aflv_0239 (purD)
View Structure
4 282686-282787 (-)purine280949-282662 (-)adeC

Adenine deaminase (Adenase) (Adenine aminase)
Aflv_0257Operon

DOOR ID: 483262
Aflv_0256,
Aflv_0257 (adeC)
View Structure
5 368638-368724 (+)c-di-GMP-I368828-370520 (+)tlpA-1

Chemotaxis sensor protein (CHASE 3; HAMP; MCP domains)
Aflv_0339single gene

DOOR ID: 2411313
Aflv_0339 (tlpA-1) View Structure
6 433924-434125 (-)cobalamin431533-433810 (-)nrdE

Ribonucleoside-diphosphate reductase
Aflv_0393Single gene

DOOR ID: 2411335
Aflv_0393 (nrdE) View Structure
7 451136-451244 (+)SAM451364-452570 (+)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)
Aflv_0414Single gene

DOOR ID: 2411341
Aflv_0414 (metK) View Structure
8 927747-927835 (+)glycine927976-929071 (+)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)
Aflv_0915Operon

DOOR ID: 483403
Aflv_0915 (gcvT),
Aflv_0916 (gcvPA),
Aflv_0917 (gcvPB)
View Structure
9 1017521-1017653 (+)FMN1017794-1018871 (+)ribD

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
Aflv_1015Operon

DOOR ID: 483424
Aflv_1015 (ribD),
Aflv_1016 (ribE),
Aflv_1017 (ribA),
Aflv_1018 (ribH)
View Structure
10 1042516-1042708 (+)cobalamin1042912-1043869 (+)Aflv_1041

ABC-type cobalamin/Fe3+-siderophore transport system; periplasmic component
Aflv_1041Operon

DOOR ID: 483430
Aflv_1041,
Aflv_1042,
Aflv_1043,
Aflv_1044 (cobD),
Aflv_1045 (cobD),
Aflv_1046 (cobU),
Aflv_1047 (cobS),
Aflv_1048 (cobC)
View Structure
11 1360065-1360180 (+)TPP1360234-1361029 (+)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
Aflv_1345Operon

DOOR ID: 483489
Aflv_1345 (thiM),
Aflv_1346 (thiE),
Aflv_1347
View Structure
12 1599486-1599568 (-)c-di-GMP-I1598533-1598791 (-)sspH

Small; acid-soluble spore protein H (SASP H)
Aflv_1599operon

DOOR ID: 483548
Aflv_1599 (sspH),
Aflv_1600
View Structure
13 1641256-1641370 (+)TPP1641469-1643179 (+)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Aflv_1650Single gene

DOOR ID: 2411700
Aflv_1650 (thiC) View Structure
14 1948341-1948385 (-)PreQ11947598-1948264 (-)Aflv_1971

7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)
Aflv_1971Operon

DOOR ID: 483604
Aflv_1969,
Aflv_1970,
Aflv_1971
View Structure
15 1964521-1964699 (+)lysine1964748-1966269 (+)Aflv_1989

Amino acid transporter
Aflv_1989Single gene

DOOR ID: 2411790
Aflv_1989 View Structure
16 1973328-1973435 (-)SAM1972046-1973267 (-)mtnW

2;3-diketo-5-methylthiopentyl-1-phosphate enolase (DK-MTP-1-P enolase) (RuBisCO-like protein) (RLP)
Aflv_1997Operon

DOOR ID: 483609
Aflv_1994,
Aflv_1995 (mtnB),
Aflv_1996 (mtnX),
Aflv_1997 (mtnW)
View Structure
17 1975676-1975775 (+)SAM1975775-1977017 (+)mtnK

Methylthioribose kinase (MTR kinase) (00)
Aflv_2000Operon

DOOR ID: 483610
Aflv_2000 (mtnK),
Aflv_2001 (mtnA),
Aflv_2002 (rbsB),
Aflv_2003 (rbsA),
Aflv_2004 (rbsC)
View Structure
18 2054094-2054201 (-)SAM2052927-2054031 (-)Aflv_2067

Cystathionine gamma-synthase(O-succinylhomoserine (Thiol)-lyase)
Aflv_2067Operon

DOOR ID: 483626
Aflv_2066,
Aflv_2067
View Structure
19 2138823-2138924 (+)SAM2138987-2140841 (+)Aflv_2165

5;10-methylenetetrahydrofolate reductase containing methyltransferase and reductase domains
Aflv_2165Operon

DOOR ID: 483644
Aflv_2165,
Aflv_2166
View Structure
20 2160993-2161178 (-)cobalamin2160485-2160857 (-)cbiW

2Fe-2S ferredoxin
Aflv_2185Operon

DOOR ID: 483645
Aflv_2167,
Aflv_2168,
Aflv_2169,
Aflv_2170,
Aflv_2171,
Aflv_2172,
Aflv_2173,
Aflv_2174,
Aflv_2175,
Aflv_2176 (cbiD),
Aflv_2177,
Aflv_2178,
Aflv_2179,
Aflv_2180,
Aflv_2181,
Aflv_2182,
Aflv_2183,
Aflv_2184,
Aflv_2185 (cbiW)
View Structure
21 2193384-2193485 (+)purine2193759-2194377 (+)Aflv_2212

Dienelactone hydrolase family protein
Aflv_2212Operon

DOOR ID: 483649
Aflv_2212,
Aflv_2213
View Structure
22 2300177-2300284 (-)TPP2299393-2300089 (-)tenA

Aminopyrimidine aminohydrolase
Aflv_2320Operon

DOOR ID: 483668
Aflv_2311,
Aflv_2312 (moeB),
Aflv_2313 (thiG),
Aflv_2314 (thiS),
Aflv_2315 (goxB),
Aflv_2316 (tenI),
Aflv_2317,
Aflv_2318,
Aflv_2319,
Aflv_2320 (tenA)
View Structure
23 2445193-2445298 (-)SAM2444092-2445121 (-)Aflv_2468

Methionine import ATP-binding protein MetN
Aflv_2468Operon

DOOR ID: 483703
Aflv_2465,
Aflv_2466,
Aflv_2467,
Aflv_2468
View Structure