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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
651177-651256
(-)
sam-alpha
649891-651103 (-)
metZ
OCAR_4661
Single gene
DOOR ID:
2400822
OCAR_4661
(metZ)
View Structure
2
760910-760989
(+)
sam-alpha
761096-762266 (+)
metX
OCAR_4776
Operon
DOOR ID:
478309
OCAR_4776
(metX)
,
OCAR_4777
(metW)
View Structure
3
1408427-1408488
(+)
fluoride
1408701-1409106 (+)
crcB
OCAR_5427
Single gene
DOOR ID:
2401177
OCAR_5427
(crcB)
View Structure
4
1416179-1416292
(-)
glycine
1414896-1416045 (-)
gcvT
OCAR_5434
Operon
DOOR ID:
478427
OCAR_5433
(gcvH)
,
OCAR_5434
(gcvT)
View Structure
5
1574853-1575108
(-)
cobalamin
1572430-1574680 (-)
OCAR_5632
OCAR_5632
Single gene
DOOR ID:
2401268
OCAR_5632
View Structure
6
2702642-2702856
(-)
cobalamin
2700167-2702582 (-)
metE
OCAR_6751
Single gene
DOOR ID:
2401776
OCAR_6751
(metE)
View Structure
7
2988271-2988381
(+)
TPP
2989408-2989606 (+)
thiS
OCAR_7029
Operon
DOOR ID:
478709
OCAR_7028
(thiO)
,
OCAR_7029
(thiS)
View Structure
Genome:
Oligotropha carboxidovorans OM5 strain OM5
(
NC_011386.1
);
Phylum:
Alphaproteobacteria
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