Genome: Thermoanaerobacter pseudethanolicus ATCC 33223 (NC_010321.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 23878-23992 (+)FMN24075-25158 (+)Teth39_0021

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]
Teth39_0021Operon

DOOR ID: 388731
Teth39_0021,
Teth39_0022,
Teth39_0023,
Teth39_0024 (ribH)
View Structure
2 239396-239498 (+)TPP239560-240199 (+)Teth39_0212

Putative proton-coupled thiamine transporter YuaJ
Teth39_0212Single gene

DOOR ID: 2215933
Teth39_0212 View Structure
3 241046-241208 (+)ykoK241588-244276 (+)Teth39_0214

Magnesium-translocating P-type ATPase
Teth39_0214Single gene

DOOR ID: 2215935
Teth39_0214 View Structure
4 498335-498489 (+)glmS498523-500350 (+)Teth39_0472

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)
Teth39_0472Single gene

DOOR ID: 2216000
Teth39_0472 View Structure
5 523252-523359 (-)TPP521907-523206 (-)Teth39_0498

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
Teth39_0498Single gene

DOOR ID: 2216013
Teth39_0498 View Structure
6 524904-525014 (+)SAM525081-526374 (+)Teth39_0500

Homoserine dehydrogenase
Teth39_0500Operon

DOOR ID: 388826
Teth39_0500,
Teth39_0501,
Teth39_0502
View Structure
7 594571-594760 (-)lysine593109-594447 (-)Teth39_0559

Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (0)
Teth39_0559Single gene

DOOR ID: 2216032
Teth39_0559 View Structure
8 673881-673940 (+)fluoride674917-676243 (+)Teth39_0625

Extracellular solute-binding protein; family 1
Teth39_0625Single gene

DOOR ID: 2216059
Teth39_0625 View Structure
9 701033-701326 (+)cobalamin701430-703509 (+)Teth39_0653

Anaerobic ribonucleoside-triphosphate reductase
Teth39_0653Operon

DOOR ID: 388854
Teth39_0653,
Teth39_0654
View Structure
10 750630-750734 (+)SAM750797-751709 (+)Teth39_0696

Methylenetetrahydrofolate reductase (0)
Teth39_0696Operon

DOOR ID: 388864
Teth39_0696,
Teth39_0697,
Teth39_0698
View Structure
11 904376-904493 (+)MOCO905116-905809 (+)Teth39_0854

Molybdopterin-guanine dinucleotide biosynthesis protein B
Teth39_0854Single gene

DOOR ID: 2216126
Teth39_0854 View Structure
12 906025-906148 (+)MOCO906349-907234 (+)Teth39_0855

Extracellular solute-binding protein; family 1
Teth39_0855Operon

DOOR ID: 388896
Teth39_0855,
Teth39_0856,
Teth39_0857
View Structure
13 1051961-1052087 (+)ydaO-yuaA1052943-1053504 (-)Teth39_0989

Teth39_0989Single gene

DOOR ID: 2216163
Teth39_0989 View Structure
14 1129065-1129148 (+)c-di-GMP-II1129174-1130851 (+)Teth39_1067

Type II secretion system protein E
Teth39_1067Operon

DOOR ID: 388936
Teth39_1067,
Teth39_1068,
Teth39_1069,
Teth39_1070
View Structure
15 1366158-1366280 (+)SAM1366349-1367384 (+)Teth39_1332

Methionine import ATP-binding protein MetN
Teth39_1332Operon

DOOR ID: 388979
Teth39_1332,
Teth39_1333,
Teth39_1334,
Teth39_1335
View Structure
16 1465761-1465892 (-)ydaO-yuaA1464558-1465659 (-)Teth39_1425

NAD/NADP octopine/nopaline dehydrogenase
Teth39_1425Operon

DOOR ID: 388993
Teth39_1424,
Teth39_1425
View Structure
17 1503372-1503502 (-)ydaO-yuaA1500285-1502109 (-)Teth39_1468

GTP-binding protein TypA
Teth39_1468Single gene

DOOR ID: 2216254
Teth39_1468 View Structure
18 1691243-1691345 (-)TPP1690390-1691185 (-)Teth39_1656

Phosphomethylpyrimidine kinase
Teth39_1656Operon

DOOR ID: 389042
Teth39_1653,
Teth39_1654,
Teth39_1655 (thiE),
Teth39_1656
View Structure
19 1757095-1757194 (-)ykkC-yxkD1755609-1756992 (-)Teth39_1718

Xanthine/uracil/vitamin C permease
Teth39_1718Operon

DOOR ID: 389054
Teth39_1708,
Teth39_1709 (purH),
Teth39_1710 (purN),
Teth39_1711,
Teth39_1712,
Teth39_1713,
Teth39_1714,
Teth39_1715,
Teth39_1716,
Teth39_1717,
Teth39_1718
View Structure
20 1757179-1757280 (-)purine1755609-1756992 (-)Teth39_1718

Xanthine/uracil/vitamin C permease
Teth39_1718Operon

DOOR ID: 389054
Teth39_1708,
Teth39_1709 (purH),
Teth39_1710 (purN),
Teth39_1711,
Teth39_1712,
Teth39_1713,
Teth39_1714,
Teth39_1715,
Teth39_1716,
Teth39_1717,
Teth39_1718
View Structure
21 1760509-1760610 (-)purine1758917-1760372 (-)Teth39_1720

Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPD) (IMPDH) (05)
Teth39_1720Operon

DOOR ID: 389055
Teth39_1719 (guaA),
Teth39_1720
View Structure
22 1786322-1786440 (-)FMN1785645-1786230 (-)Teth39_1746

Riboflavin transporter
Teth39_1746Single gene

DOOR ID: 2216332
Teth39_1746 View Structure
23 1833128-1833232 (-)SAM1831882-1833070 (-)Teth39_1790

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)
Teth39_1790Single gene

DOOR ID: 2216348
Teth39_1790 View Structure
24 1937960-1938175 (-)cobalamin1937087-1937837 (-)Teth39_1886

Cobalt transport protein CbiM (Energy-coupling factor transporter probable substrate-capture protein CbiM) (ECF transporter S component CbiM)
Teth39_1886Operon

DOOR ID: 389085
Teth39_1883,
Teth39_1884,
Teth39_1885,
Teth39_1886
View Structure
25 1954429-1954621 (-)cobalamin1953365-1954313 (-)Teth39_1904

Periplasmic binding protein
Teth39_1904Operon

DOOR ID: 389087
Teth39_1894 (cobS),
Teth39_1895 (cobU),
Teth39_1896,
Teth39_1897,
Teth39_1898,
Teth39_1899,
Teth39_1900,
Teth39_1901,
Teth39_1902,
Teth39_1903,
Teth39_1904
View Structure
26 2041390-2041495 (+)glycine2041643-2042750 (+)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)
Teth39_1988Operon

DOOR ID: 389102
Teth39_1988 (gcvT),
Teth39_1989,
Teth39_1990,
Teth39_1991
View Structure
27 2270957-2271016 (-)fluoride2270490-2270895 (-)Teth39_2197

Putative fluoride ion transporter CrcB
Teth39_2197Operon

DOOR ID: 389148
Teth39_2196,
Teth39_2197
View Structure