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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
1721514-1721607
(-)
c-di-GMP-I
1720342-1720915 (-)
AM1_1734
Uncharacterized protein
AM1_1734
single gene
DOOR ID:
2154103
AM1_1734
View Structure
2
2595141-2595223
(+)
glutamine
2595260-2595710 (+)
AM1_2559
AM1_2559
Single gene
DOOR ID:
2154567
AM1_2559
View Structure
3
2814963-2815158
(-)
cobalamin
2814300-2814939 (-)
hupE
Hydrogenase accessory protein HupE/UreJ; putative
AM1_2783
Single gene
DOOR ID:
2154679
AM1_2783
(hupE)
View Structure
4
2875834-2875970
(+)
ykkC-yxkD
2876118-2877315 (+)
speB
Agmatinase; putative
AM1_2833
Operon
DOOR ID:
362342
AM1_2833
(speB)
,
AM1_2834
(hypA)
,
AM1_2835
(hypB)
,
AM1_2836
View Structure
5
3032594-3032687
(-)
TPP
3031209-3032586 (-)
thiC
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
AM1_3002
Operon
DOOR ID:
362373
AM1_3001,
AM1_3002
(thiC)
View Structure
6
3254265-3254355
(+)
glutamine
3254385-3254832 (+)
AM1_3215
AM1_3215
Single gene
DOOR ID:
2154916
AM1_3215
View Structure
7
4797614-4797700
(-)
c-di-GMP-I
4796129-4797575 (+)
AM1_4755
Undecaprenyl-phosphate galactosephosphotransferase; putative
AM1_4755
single gene
DOOR ID:
2155801
AM1_4755
View Structure
8
6028526-6028655
(-)
AdoCbl
6026769-6027831 (-)
cobW
Cobalamin biosynthesis protein CobW
AM1_5964
Operon
DOOR ID:
362849
AM1_5964
(cobW)
,
AM1_5965
View Structure
9
6028550-6028691
(-)
cobalamin
6027859-6028531 (-)
AM1_5965
Hydrogenase accessory protein HupE / UreJ protein
AM1_5965
Operon
DOOR ID:
362849
AM1_5964
(cobW)
,
AM1_5965
View Structure
Genome:
Acaryochloris marina MBIC11017
(
NC_009925.1
);
Phylum:
Cyanobacteria/Melainabacteria group
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