Genome: Escherichia coli E24377A (NC_009801.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 77201-77300 (-)TPP76186-77170 (-)tbpA

Thiamin/thiamin pyrophosphate ABC transporter; periplasmic thiamin/thiamin pyrophospate-binding protein

DOOR ID: 352473
EcE24377A_0068 (thiQ),
EcE24377A_0069 (thiP),
EcE24377A_0070 (tbpA)
View Structure
2 865089-865233 (+)MOCO866231-866744 (+)moaB

Molybdenum cofactor biosynthesis protein B

DOOR ID: 352637
EcE24377A_0844 (moaA),
EcE24377A_0845 (moaB),
EcE24377A_0846 (moaC),
EcE24377A_0847 (moaD),
EcE24377A_0848 (moaE)
View Structure
3 2033053-2033154 (+)yybP-ykoY2033285-2033852 (+)EcE24377A_2050

Probable manganese efflux pump MntP
EcE24377A_2050Single gene

DOOR ID: 2134261
EcE24377A_2050 View Structure
4 2244380-2244555 (-)cobalamin2243724-2244162 (-)EcE24377A_2276

Cobalamin biosynthesis family protein
EcE24377A_2276Single gene

DOOR ID: 2133702
EcE24377A_2276 View Structure
5 2366838-2366934 (-)TPP2366014-2366803 (-)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)

DOOR ID: 352914
EcE24377A_2391 (thiD),
EcE24377A_2392 (thiM)
View Structure
6 3515592-3515740 (-)FMN3514834-3515488 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
EcE24377A_3506Single gene

DOOR ID: 2133663
EcE24377A_3506 (ribB) View Structure
7 4500496-4500686 (+)cobalamin4500750-4502595 (+)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)

DOOR ID: 353334
EcE24377A_4507 (btuB),
EcE24377A_4508 (murI)
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8 4533206-4533306 (-)TPP4531229-4533125 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)

DOOR ID: 353340
EcE24377A_4531 (thiH),
EcE24377A_4532 (thiG),
EcE24377A_4533 (thiS),
EcE24377A_4534 (thiF),
EcE24377A_4535 (thiE),
EcE24377A_4536 (thiC)
View Structure
9 4572587-4572783 (-)lysine4571145-4572495 (-)lysC

EcE24377A_4572Single gene

DOOR ID: 2134585
EcE24377A_4572 (lysC) View Structure
10 4709491-4709537 (+)mini-ykkC4709554-4709872 (+)sugE

EcE24377A_4708Single gene

DOOR ID: 2133388
EcE24377A_4708 (sugE) View Structure
11 4806695-4806810 (+)Mg sensor4806903-4809600 (+)mgtA

Magnesium-translocating P-type ATPase
EcE24377A_4814Single gene

DOOR ID: 2134514
EcE24377A_4814 (mgtA) View Structure