Genome: Janthinobacterium sp. Marseille (NC_009659.1); Phylum: Betaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 54908-55011 (+)TPP55071-57258 (+)mma_0045

TonB-dependent siderophore receptor
mma_0045Single gene

DOOR ID: 2092348
mma_0045 View Structure
2 88035-88081 (+)mini-ykkC88464-88992 (-)mma_0079

mma_0079Single gene

DOOR ID: 2091686
mma_0079 View Structure
3 113784-113821 (+)SAM-SAH113826-114333 (+)tctB1

Small permease component of tripartite tricarboxylate transporter

DOOR ID: 331655
mma_0101 (tctC1),
mma_0102 (tctB1),
mma_0103 (tctA1),
mma_0104 (mdcA1),
mma_0105 (mdcC1),
mma_0106 (mdcD1),
mma_0107 (mdcE1),
mma_0108 (mdcG1),
mma_0109 (mdcB1),
mma_0110 (mdcH1),
View Structure
4 424057-424165 (+)TPP424277-426191 (+)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)

DOOR ID: 331721
mma_0384 (thiC),
mma_0385 (thiS2)
View Structure
5 1205514-1205610 (-)TPP1204172-1205462 (-)mma_1067

Cytosine/purine/uracil/thiamine/allantoin permease family protein (NCS1 family)
mma_1067Single gene

DOOR ID: 2091448
mma_1067 View Structure
6 1232608-1232836 (+)cobalamin1232927-1234928 (+)mma_1091

Outer membrane hemin/siderophore receptor protein
mma_1091Single gene

DOOR ID: 2092358
mma_1091 View Structure
7 1235080-1235294 (+)cobalamin1235440-1237312 (+)mma_1092

mma_1092Single gene

DOOR ID: 2091794
mma_1092 View Structure
8 1525963-1526137 (+)FMN1526213-1526717 (+)ribH1

6;7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (LS) (Lumazine synthase) (8)
mma_1345Single gene

DOOR ID: 2091509
mma_1345 (ribH1) View Structure
9 1912393-1912479 (-)SAH1911401-1911983 (+)mma_1692

NAD(P)H-flavin oxidoreductase
mma_1692Single gene

DOOR ID: 2092065
mma_1692 View Structure
10 2767971-2768093 (-)ZMP-ZTP2766576-2767821 (-)glyA

Serine hydroxymethyltransferase (SHMT) (Serine methylase)
mma_2443Single gene

DOOR ID: 2091433
mma_2443 (glyA) View Structure
11 3571580-3571658 (-)SAH3570113-3571553 (-)ahcY

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
mma_3196Single gene

DOOR ID: 2091565
mma_3196 (ahcY) View Structure
12 3948100-3948268 (+)yybP-ykoY3948287-3948863 (+)mma_3551

mma_3551Single gene

DOOR ID: 2091908
mma_3551 View Structure