Genome: Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (NC_009648.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 79060-79189 (-)TPP78042-79026 (-)tbpA

Thiamin-binding periplasmic protein
KPN_00067Operon

DOOR ID: 328059
KPN_00065 (thiQ),
KPN_00066 (thiP),
KPN_00067 (tbpA)
View Structure
2 905889-906027 (+)MOCO907027-907540 (+)moaB

Molybdenum cofactor biosynthesis protein B
KPN_00811Operon

DOOR ID: 328209
KPN_00810 (moaA),
KPN_00811 (moaB),
KPN_00812 (moaC),
KPN_00813 (moaD),
KPN_00814 (moaE),
KPN_00815 (ybhL)
View Structure
3 1075747-1075801 (-)fluoride1070753-1075202 (+)mukB

Chromosome partition protein MukB (Structural maintenance of chromosome-related protein)
KPN_00951Operon

DOOR ID: 328239
KPN_00948 (smtA),
KPN_00949 (mukF),
KPN_00950 (mukE),
KPN_00951 (mukB)
View Structure
4 1985255-1985356 (+)TPP1985424-1986120 (+)KPN_01799

Aminopyrimidine aminohydrolase
KPN_01799Operon

DOOR ID: 328382
KPN_01799,
KPN_01800,
KPN_01801
View Structure
5 2559997-2560099 (+)yybP-ykoY2560252-2560783 (+)yebN

Putative manganese efflux pump MntP
KPN_02337Single gene

DOOR ID: 2085292
KPN_02337 (yebN) View Structure
6 2797685-2797782 (-)TPP2796876-2797650 (-)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)
KPN_02551Operon

DOOR ID: 328514
KPN_02550 (thiD),
KPN_02551 (thiM)
View Structure
7 3513100-3513278 (-)cobalamin3511630-3513085 (-)cbiA

Cobyrinate a;c-diamide synthase (1) (Cobyrinic acid a;c-diamide synthetase)
KPN_03200Operon

DOOR ID: 328646
KPN_03182 (cobT),
KPN_03183 (cobU),
KPN_03184 (cbiP),
KPN_03185 (cbiO),
KPN_03186 (cboQ),
KPN_03187 (cbiN),
KPN_03188 (cbiM),
KPN_03189 (cbiL),
KPN_03190 (cbiK),
KPN_03191 (cbiJ),
KPN_03192 (cbiH),
KPN_03193 (cbiG),
KPN_03194 (cbiF),
KPN_03195 (cbiT),
KPN_03196 (cbiE),
KPN_03197 (cbiD),
KPN_03198 (cbiC),
KPN_03199 (cobD),
KPN_03200 (cbiA)
View Structure
8 3778913-3779064 (-)FMN3778153-3778807 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
KPN_03454Single gene

DOOR ID: 2085728
KPN_03454 (ribB) View Structure
9 4212343-4212524 (+)ykoK4212581-4213595 (+)KPN_03856

Putative Mg/Co/Ni transporter MgtE
KPN_03856Single gene

DOOR ID: 2085856
KPN_03856 View Structure
10 4660061-4660248 (+)cobalamin4660312-4662169 (+)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)
KPN_04255Operon

DOOR ID: 328868
KPN_04255 (btuB),
KPN_04256 (murI)
View Structure
11 4788287-4788411 (-)TPP4786305-4788201 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
KPN_04376Operon

DOOR ID: 328890
KPN_04371 (thiH),
KPN_04372 (thiG),
KPN_04373 (thiS),
KPN_04374 (thiF),
KPN_04375 (thiE),
KPN_04376 (thiC)
View Structure
12 4829675-4829910 (-)lysine4828145-4829495 (-)lysC

Aspartokinase
KPN_04412Single gene

DOOR ID: 2086058
KPN_04412 (lysC) View Structure
13 4978448-4978492 (+)mini-ykkC4978505-4978823 (+)sugE

KPN_04548Single gene

DOOR ID: 2086134
KPN_04548 (sugE) View Structure
14 5085745-5085861 (+)Mg sensor5085959-5088668 (+)mgtA

Mg2+ transport ATPase; P-type 1
KPN_04654Single gene

DOOR ID: 2086177
KPN_04654 (mgtA) View Structure