Genome: Yersinia pestis Pestoides F (NC_009381.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 499497-499686 (+)FMN499927-500581 (+)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)
YPDSF_0441Single gene

DOOR ID: 2016964
YPDSF_0441 (ribB) View Structure
2 1535616-1535815 (+)yybP-ykoY1535825-1536395 (+)YPDSF_1370

Putative manganese efflux pump MntP
YPDSF_1370Single gene

DOOR ID: 2017369
YPDSF_1370 View Structure
3 2497247-2497351 (-)TPP2496322-2497123 (-)YPDSF_2209

YPDSF_2209Single gene

DOOR ID: 2017755
YPDSF_2209 View Structure
4 2886744-2886890 (-)MOCO2885196-2885676 (-)moaC

Cyclic pyranopterin monophosphate synthase (7) (Molybdenum cofactor biosynthesis protein C)
YPDSF_2537Operon

DOOR ID: 293958
YPDSF_2535 (moaE),
YPDSF_2536 (moaD),
YPDSF_2537 (moaC),
YPDSF_2538 (moaA)
View Structure
5 3010272-3010335 (+)fluoride3010435-3010819 (+)YPDSF_2658

YPDSF_2658Single gene

DOOR ID: 2017974
YPDSF_2658 View Structure
6 3533309-3533446 (+)TPP3534476-3536096 (+)thiP

YPDSF_3113Operon

DOOR ID: 294076
YPDSF_3112 (tbpA),
YPDSF_3113 (thiP),
YPDSF_3114 (thiQ)
View Structure
7 4047740-4048002 (-)cobalamin4045775-4047671 (-)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)
YPDSF_3522Operon

DOOR ID: 294152
YPDSF_3521,
YPDSF_3522 (btuB)
View Structure
8 4157696-4157742 (-)mini-ykkC4156840-4157197 (+)YPDSF_3617

YPDSF_3617Operon

DOOR ID: 294168
YPDSF_3614,
YPDSF_3615,
YPDSF_3616,
YPDSF_3617
View Structure
9 4294884-4295009 (+)TPP4295142-4297188 (+)YPDSF_3736

YPDSF_3736Operon

DOOR ID: 294194
YPDSF_3736,
YPDSF_3737,
YPDSF_3738,
YPDSF_3739
View Structure