Genome: Saccharopolyspora erythraea NRRL 2338 (NC_009142.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 33343-33443 (+)SAH35137-42106 (+)SACE_0023

Beta-ketoacyl synthase (0) (PfaB family protein)
SACE_0023Operon

DOOR ID: 283716
SACE_0018,
SACE_0019,
SACE_0020,
SACE_0021,
SACE_0022,
SACE_0023,
SACE_0024,
SACE_0025,
SACE_0026 (accA),
SACE_0027,
SACE_0028
View Structure
2 559560-559669 (+)TPP559678-560809 (+)SACE_0506

Amino acid oxidase flavoprotein ThiO; putative
SACE_0506Operon

DOOR ID: 283804
SACE_0506,
SACE_0507 (ThiS),
SACE_0508 (thiG)
View Structure
3 566638-566761 (-)TPP564035-564902 (-)thiD

Phosphomethylpyrimidine kinase
SACE_0510Operon

DOOR ID: 283805
SACE_0510 (thiD),
SACE_0511 (thiC)
View Structure
4 627035-627193 (-)ydaO-yuaA626427-627033 (-)SACE_0567

LysM domain-containing protein (Secreted protein)
SACE_0567Single gene

DOOR ID: 1997038
SACE_0567 View Structure
5 683556-683630 (+)cobalamin683737-684682 (+)SACE_0620

Putative iron ABC transporter binding protein
SACE_0620Operon

DOOR ID: 283824
SACE_0620,
SACE_0621,
SACE_0622 (fecC)
View Structure
6 897555-897642 (+)SAM897908-898928 (+)SACE_0804

Methionine import ATP-binding protein MetN
SACE_0804Operon

DOOR ID: 283863
SACE_0804,
SACE_0805,
SACE_0806
View Structure
7 1093457-1093545 (+)TPP1093584-1094631 (+)SACE_0981

ABC transporter substrate-binding protein (Thiamine transport system substrate-binding protein)
SACE_0981Operon

DOOR ID: 283885
SACE_0981,
SACE_0982,
SACE_0983
View Structure
8 1414388-1414592 (-)cobalamin1411816-1414165 (-)nrdA

Ribonucleoside-diphosphate reductase
SACE_1283Operon

DOOR ID: 283937
SACE_1282 (nrdB),
SACE_1283 (nrdA)
View Structure
9 1430048-1430143 (+)TPP1430952-1431693 (+)SACE_1298

Aminopyrimidine aminohydrolase
SACE_1298Operon

DOOR ID: 283940
SACE_1297 (thiD),
SACE_1298
View Structure
10 1588966-1589093 (-)SAM1587681-1588953 (-)SACE_1437

Threonine synthase
SACE_1437Single gene

DOOR ID: 1997454
SACE_1437 View Structure
11 1593002-1593136 (+)ykkC-yxkD1593175-1594039 (+)SACE_1443

EamA-like transporter family protein (Possible transporter; DMT superfamily)
SACE_1443Operon

DOOR ID: 283970
SACE_1443,
SACE_1444
View Structure
12 1677783-1677918 (+)FMN1678024-1678672 (+)SACE_1530

Nicotinamide mononucleotide transporter
SACE_1530Single gene

DOOR ID: 1997498
SACE_1530 View Structure
13 1860918-1861071 (+)ydaO-yuaA1861159-1862134 (+)SACE_1692

Cell wall-associated NlpC family hydrolase (NLP/P60-family protein)
SACE_1692Single gene

DOOR ID: 1997567
SACE_1692 View Structure
14 4206454-4206556 (-)glycine4203381-4206279 (-)gcvP1

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))
SACE_3842Single gene

DOOR ID: 1998628
SACE_3842 (gcvP1) View Structure
15 4900027-4900223 (-)cobalamin4898922-4899822 (-)SACE_4375

Putative ABC transporter solute-binding protein
SACE_4375Operon

DOOR ID: 284500
SACE_4373,
SACE_4374,
SACE_4375
View Structure
16 5303054-5303317 (+)cobalamin5303453-5305739 (+)metE

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)
SACE_4744Single gene

DOOR ID: 1999060
SACE_4744 (metE) View Structure
17 5585156-5585244 (+)SAH5585357-5586608 (+)SACE_5011

SACE_5011Single gene

DOOR ID: 1999209
SACE_5011 View Structure
18 6403599-6403692 (+)glycine6403917-6405021 (+)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)
SACE_5701Operon

DOOR ID: 284707
SACE_5701 (gcvT),
SACE_5702 (glyA)
View Structure
19 6403694-6403798 (+)glycine6403917-6405021 (+)gcvT

Aminomethyltransferase (0) (Glycine cleavage system T protein)
SACE_5701Operon

DOOR ID: 284707
SACE_5701 (gcvT),
SACE_5702 (glyA)
View Structure
20 6539066-6539181 (-)SAM-IV6537665-6539018 (-)SACE_5825

Cysteine desulfurase
SACE_5825Operon

DOOR ID: 284730
SACE_5823 (rlu),
SACE_5824 (lspA),
SACE_5825
View Structure
21 6681435-6681556 (+)cobalamin6682041-6685647 (+)cobN

Cobalamin biosynthesis protein N (Cobaltochelatase CobN subunit)
SACE_5955Single gene

DOOR ID: 1999660
SACE_5955 (cobN) View Structure
22 6688720-6688844 (-)cobalamin6687483-6688644 (-)nicT2

Nickel/cobalt efflux system
SACE_5958Single gene

DOOR ID: 1999663
SACE_5958 (nicT2) View Structure
23 6698393-6698575 (-)cobalamin6696205-6698356 (-)chlI

Magnesium chelatase subunit D (Putative magnesium-chelatase subunit)
SACE_5965Single gene

DOOR ID: 1999665
SACE_5965 (chlI) View Structure
24 7144779-7144886 (-)glycine7144263-7144635 (-)gcvH

Glycine cleavage system H protein
SACE_6378Operon

DOOR ID: 284836
SACE_6377 (sdaA),
SACE_6378 (gcvH)
View Structure