Genome: Bacillus thuringiensis str. Al Hakam (NC_008600.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 163246-163401 (+)glmS163592-165395 (+)glmS

Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (6) (D-fructose-6-phosphate amidotransferase) (GFAT) (Glucosamine-6-phosphate synthase) (Hexosephosphate aminotransferase) (L-glutamine--D-fructose-6-phosphate amidotransferase)		BALH_0155Single gene

DOOR ID: 1918307		BALH_0155 (glmS) View Structure
2 184117-184231 (-)SAM183217-184030 (-)BALH_0174

Lipoprotein		BALH_0174Operon

DOOR ID: 244288		BALH_0172,
BALH_0173,
BALH_0174		 View Structure
3 192545-192650 (+)SAM192786-193704 (+)oppB

Oligopeptide ABC transporter; permease component		BALH_0184Operon

DOOR ID: 244290		BALH_0184 (oppB),
BALH_0185 (oppC),
BALH_0186 (oppD),
BALH_0187 (oppF),
BALH_0188 (oppA)		 View Structure
4 205543-205649 (-)SAM203769-205410 (-)oppA

Oligopeptide transporter; periplasmic-binding protein		BALH_0195Single gene

DOOR ID: 1918327		BALH_0195 (oppA) View Structure
5 274643-274744 (+)purine274900-276448 (+)guaA

GMP synthase [glutamine-hydrolyzing] (GMP synthetase) (Glutamine amidotransferase)		BALH_0254Single gene

DOOR ID: 1918356		BALH_0254 (guaA) View Structure
6 283558-283659 (+)purine283787-285113 (+)BALH_0264

Guanine-hypoxanthine permease; xanthine/uracil permease family protein		BALH_0264Single gene

DOOR ID: 1918361		BALH_0264 View Structure
7 324753-324854 (+)purine324943-325450 (+)purE

N5-carboxyaminoimidazole ribonucleotide mutase (N5-CAIR mutase) (8) (5-(carboxyamino)imidazole ribonucleotide mutase)		BALH_0282Operon

DOOR ID: 244306		BALH_0282 (purE),
BALH_0283 (purK),
BALH_0284 (purB),
BALH_0285 (purC),
BALH_0286 (purS),
BALH_0287 (purQ),
BALH_0288 (purL),
BALH_0289 (purF),
BALH_0290 (purM),
BALH_0291 (purN),
BALH_0292 (purH),
BALH_0293 (purD)		 View Structure
8 350036-350142 (+)SAM350163-351285 (+)BALH_0303

Methionine import ATP-binding protein MetN 		BALH_0303Operon

DOOR ID: 244308		BALH_0303,
BALH_0304,
BALH_0305		 View Structure
9 373059-373160 (-)purine371659-372856 (-)BALH_0323

Nucleoside transporter; NupC family		BALH_0323Single gene

DOOR ID: 1918380		BALH_0323 View Structure
10 403173-403285 (-)SAM402453-403161 (-)BALH_0350

BALH_0350Single gene

DOOR ID: 1918393		BALH_0350 View Structure
11 432010-432119 (+)TPP432182-432998 (+)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)		BALH_0374Operon

DOOR ID: 244322		BALH_0374 (thiM),
BALH_0375 (thiE)		 View Structure
12 435376-435460 (+)c-di-GMP-I435592-437344 (+)cheW

Methyl-accepting chemotaxis protein		BALH_0377single gene

DOOR ID: 1918408		BALH_0377 (cheW) View Structure
13 437406-437508 (+)TPP437607-437928 (+)BALH_0378

BALH_0378Operon

DOOR ID: 244323		BALH_0378,
BALH_0379,
BALH_0380,
BALH_0381		 View Structure
14 772635-772748 (+)TPP772995-773691 (+)tenA

Aminopyrimidine aminohydrolase 		BALH_0661Operon

DOOR ID: 244372		BALH_0661 (tenA),
BALH_0662,
BALH_0663,
BALH_0665,
BALH_0666,
BALH_0667 (goxB),
BALH_0668 (thiS),
BALH_0669 (thiG),
BALH_0670 (thiF),
BALH_0671 (thiD)		 View Structure
15 772809-772911 (+)TPP772995-773691 (+)tenA

Aminopyrimidine aminohydrolase 		BALH_0661Operon

DOOR ID: 244372		BALH_0661 (tenA),
BALH_0662,
BALH_0663,
BALH_0665,
BALH_0666,
BALH_0667 (goxB),
BALH_0668 (thiS),
BALH_0669 (thiG),
BALH_0670 (thiF),
BALH_0671 (thiD)		 View Structure
16 780808-780955 (+)ydaO-yuaA781362-781545 (-)BALH_0672

BALH_0672Single gene

DOOR ID: 1918536		BALH_0672 View Structure
17 781944-782089 (+)ydaO-yuaA782389-784057 (+)kdpA

Potassium-transporting ATPase potassium-binding subunit (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) (Potassium-translocating ATPase A chain)		BALH_0673Operon

DOOR ID: 244373		BALH_0673 (kdpA),
BALH_0674 (kdpB),
BALH_0675 (kdpC),
BALH_0676 (kdpD)		 View Structure
18 878190-878371 (-)lysine876617-878141 (-)arcD

Lysine:proton symporter; APA family		BALH_0768Operon

DOOR ID: 244391		BALH_0767 (ecsB),
BALH_0768 (arcD)		 View Structure
19 1077635-1077727 (+)c-di-GMP-I1077787-1083427 (+)BALH_0943

Collagen adhesion protein		BALH_0943single gene

DOOR ID: 1918660		BALH_0943 View Structure
20 1328973-1329137 (-)yybP-ykoY1327031-1327883 (-)BALH_1170

Formate/nitrite transporter family protein		BALH_1170Single gene

DOOR ID: 1918781		BALH_1170 View Structure
21 1358776-1358819 (+)PreQ11358903-1359575 (+)BALH_1202

7-cyano-7-deazaguanine synthase (0) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC)		BALH_1202Operon

DOOR ID: 244461		BALH_1202,
BALH_1203,
BALH_1204,
BALH_1205		 View Structure
22 1421188-1421369 (+)lysine1421516-1422866 (+)BALH_1275

Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (0)		BALH_1275Single gene

DOOR ID: 1918830		BALH_1275 View Structure
23 1422983-1423091 (+)SAM1423393-1424098 (+)BALH_1276

Phosphoadenosine phosphosulfate reductase (3'-phosphoadenylylsulfate reductase) (PAPS reductase; thioredoxin dependent) (PAPS sulfotransferase) (PAdoPS reductase)		BALH_1276Operon

DOOR ID: 244470		BALH_1276,
BALH_1277 (sat),
BALH_1278,
BALH_1279,
BALH_1280		 View Structure
24 1435718-1435823 (+)SAM1435858-1437235 (+)BALH_1291

Putative methionine transporter; NhaC family		BALH_1291Single gene

DOOR ID: 1918833		BALH_1291 View Structure
25 1482197-1482336 (+)FMN1482471-1483077 (+)BALH_1338

Riboflavin transporter		BALH_1338Single gene

DOOR ID: 1918856		BALH_1338 View Structure
26 1557047-1557148 (+)purine1557168-1557849 (+)BALH_1417

Xanthine phosphoribosyltransferase (XPRTase) (2)		BALH_1417Operon

DOOR ID: 244496		BALH_1417,
BALH_1418 (pbuX)		 View Structure
27 1569753-1569916 (+)ykoK1570261-1570987 (+)BALH_1428

Cation transporter		BALH_1428Single gene

DOOR ID: 1918886		BALH_1428 View Structure
28 1591824-1591868 (+)PreQ11591874-1592360 (+)BALH_1438

BALH_1438Single gene

DOOR ID: 1918892		BALH_1438 View Structure
29 1736888-1737074 (-)lysine1735458-1736688 (-)BALH_1589

Aspartokinase 		BALH_1589Single gene

DOOR ID: 1918950		BALH_1589 View Structure
30 1810259-1810405 (+)ydaO-yuaA1810550-1812377 (+)BALH_1662

Amino acid/polyamine/organocation transporter; APC superfamily		BALH_1662Single gene

DOOR ID: 1918989		BALH_1662 View Structure
31 2277492-2277611 (-)glycine2276016-2277384 (-)BALH_2120

Na(+)-linked D-alanine glycine permease		BALH_2120Single gene

DOOR ID: 1919196		BALH_2120 View Structure
32 2521994-2522099 (+)TPP2522174-2522912 (+)BALH_2351

Aminopyrimidine aminohydrolase 		BALH_2351Single gene

DOOR ID: 1919328		BALH_2351 View Structure
33 2549385-2549500 (+)SAM2549639-2550188 (+)BALH_2375

BALH_2375Operon

DOOR ID: 244650		BALH_2375,
BALH_2376 (cbiO),
BALH_2378		 View Structure
34 2910205-2910397 (+)lysine2910404-2911976 (+)lysP

Lysine:proton symporter; AAT family		BALH_2747Operon

DOOR ID: 244720		BALH_2747 (lysP),
BALH_2748,
BALH_2749		 View Structure
35 3033279-3033380 (-)SAM3031984-3033190 (-)BALH_2862

Peptidase M20 domain-containing protein 2		BALH_2862Single gene

DOOR ID: 1919568		BALH_2862 View Structure
36 3165860-3165958 (-)SAM3164860-3165298 (-)BALH_2977

BALH_2977Operon

DOOR ID: 244759		BALH_2976,
BALH_2977		 View Structure
37 3178126-3178229 (-)purine3177071-3178061 (-)mtn

Putative 5-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase 		BALH_2989Single gene

DOOR ID: 1919637		BALH_2989 (mtn) View Structure
38 3219376-3219517 (+)ydaO-yuaA3219813-3220569 (-)BALH_3033

Possible ubiE/COQ5 methyltransferase family		BALH_3033Operon

DOOR ID: 244769		BALH_3033,
BALH_3034		 View Structure
39 3632023-3632124 (-)purine3631063-3631804 (-)BALH_3421

Transcriptional regulator; GntR family		BALH_3421Single gene

DOOR ID: 1919843		BALH_3421 View Structure
40 3845995-3846183 (+)cobalamin3846310-3848599 (+)BALH_3622

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		BALH_3622Single gene

DOOR ID: 1919911		BALH_3622 View Structure
41 3876952-3877093 (-)SAM3875679-3876861 (-)mtnK

Methylthioribose kinase (MTR kinase) (00)		BALH_3650Operon

DOOR ID: 244883		BALH_3649 (mtnA),
BALH_3650 (mtnK)		 View Structure
42 3879287-3879394 (+)SAM3879458-3880703 (+)mtnW

2;3-diketo-5-methylthiopentyl-1-phosphate enolase (DK-MTP-1-P enolase) (RuBisCO-like protein) (RLP)		BALH_3653Operon

DOOR ID: 244884		BALH_3653 (mtnW),
BALH_3654 (mtnX),
BALH_3655 (mtnB),
BALH_3656		 View Structure
43 3940252-3940395 (+)FMN3940679-3941819 (+)BALH_3725

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		BALH_3725Operon

DOOR ID: 244895		BALH_3725,
BALH_3726,
BALH_3727,
BALH_3728 (ribH)		 View Structure
44 3949795-3949857 (-)glutamine3948326-3949055 (-)bioD

ATP-dependent dethiobiotin synthetase BioD (DTB synthetase) (DTBS) (Dethiobiotin synthase)		BALH_3734Operon

DOOR ID: 244896		BALH_3730,
BALH_3731,
BALH_3732,
BALH_3733 (bioF),
BALH_3734 (bioD),
BALH_3735 (bioA)		 View Structure
45 4061014-4061123 (-)SAM4059109-4060942 (-)metE

5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (3)		BALH_3851Operon

DOOR ID: 244919		BALH_3848,
BALH_3849 (murG),
BALH_3850 (metH),
BALH_3851 (metE)		 View Structure
46 4061326-4061435 (+)SAM4062638-4063802 (+)metC

Cystathionine beta-lyase 		BALH_3853Operon

DOOR ID: 244920		BALH_3852 (metC),
BALH_3853 (metC)		 View Structure
47 4558882-4559003 (-)SAM4557512-4558712 (-)metK

S-adenosylmethionine synthase (AdoMet synthase) (MAT) (Methionine adenosyltransferase)		BALH_4340Single gene

DOOR ID: 1920182		BALH_4340 (metK) View Structure
48 4600909-4601010 (+)TPP4601975-4603829 (-)BALH_4384

Sensory histidine kinase 		BALH_4384Operon

DOOR ID: 245035		BALH_4384,
BALH_4385,
BALH_4386		 View Structure
49 4758763-4758870 (-)SAM4757437-4758463 (-)BALH_4519

Methionine import ATP-binding protein MetN 		BALH_4519Operon

DOOR ID: 245060		BALH_4516,
BALH_4517,
BALH_4518,
BALH_4519		 View Structure
50 4850198-4850257 (+)fluoride4850693-4850930 (-)BALH_4608

BALH_4608Single gene

DOOR ID: 1920309		BALH_4608 View Structure
51 4975139-4975254 (-)TPP4973265-4975026 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		BALH_4725Single gene

DOOR ID: 1920346		BALH_4725 (thiC) View Structure
52 5171320-5171425 (-)SAM5169928-5171227 (-)cysD

O-acetylhomoserine sulfhydrolase (9)		BALH_4907Operon

DOOR ID: 245138		BALH_4906 (metA),
BALH_4907 (cysD)		 View Structure