About
Search
Advanced Search
Genomes
Predict
About us
S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
297483-297620
(-)
AdoCbl
296698-297460 (-)
LBL_0248
LBL_0248
Single gene
DOOR ID:
1883497
LBL_0248
View Structure
2
1001897-1002074
(+)
cobalamin
1002168-1004301 (+)
btuB
LBL_0862
Operon
DOOR ID:
226688
LBL_0862
(btuB)
,
LBL_0863
View Structure
3
3169245-3169339
(-)
TPP
3167583-3169119 (-)
thiC
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
LBL_2674
Single gene
DOOR ID:
1884307
LBL_2674
(thiC)
View Structure
Genome:
Leptospira borgpetersenii serovar Hardjo-bovis str. L550
(
NC_008508.1
);
Phylum:
Spirochaetia
a:4:{i:0;a:18:{i:0;s:5:"S.No.";i:1;s:9:"Genome_ID";i:2;s:11:"Genome_Name";i:3;s:13:"Taxonomy_name";i:4;s:6:"Tax_ID";i:5;s:19:"Riboswitch_Location";i:6;s:17:"Riboswitch_strand";i:7;s:16:"Riboswitch_class";i:8;s:14:"Tandem_Aptamer";i:9;s:24:"Downstream_gene_location";i:10;s:11:"Gene_Strand";i:11;s:20:"Downstream_gene_name";i:12;s:24:"Gene_product_description";i:13;s:9:"Locus_tag";i:14;s:25:"Single_gene/within_operon";i:15;s:9:"Operon_ID";i:16;s:14:"Operon_details";i:17;s:22:"Biological_process[GO]";}i:1;a:19:{i:0;i:1;i:1;s:11:"NC_008508.1";i:2;s:57:"Leptospira borgpetersenii serovar Hardjo-bovis str. L550 ";i:3;s:12:"Spirochaetia";i:4;s:6:"203692";i:5;s:13:"297483-297620";i:6;s:1:"-";i:7;s:6:"AdoCbl";i:8;s:0:"";i:9;s:13:"296698-297460";i:10;s:1:"-";i:11;s:8:"LBL_0248";i:12;s:0:"";i:13;s:8:"LBL_0248";i:14;s:11:"Single gene";i:15;s:7:"1883497";i:16;s:8:"LBL_0248";i:17;s:0:"";i:18;s:15:"View Structure ";}i:2;a:19:{i:0;i:2;i:1;s:11:"NC_008508.1";i:2;s:57:"Leptospira borgpetersenii serovar Hardjo-bovis str. L550 ";i:3;s:12:"Spirochaetia";i:4;s:6:"203692";i:5;s:15:"1001897-1002074";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:15:"1002168-1004301";i:10;s:1:"+";i:11;s:4:"btuB";i:12;s:0:"";i:13;s:8:"LBL_0862";i:14;s:6:"Operon";i:15;s:6:"226688";i:16;s:23:"LBL_0862(btuB);LBL_0863";i:17;s:0:"";i:18;s:15:"View Structure ";}i:3;a:19:{i:0;i:3;i:1;s:11:"NC_008508.1";i:2;s:57:"Leptospira borgpetersenii serovar Hardjo-bovis str. L550 ";i:3;s:12:"Spirochaetia";i:4;s:6:"203692";i:5;s:15:"3169245-3169339";i:6;s:1:"-";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:15:"3167583-3169119";i:10;s:1:"-";i:11;s:4:"thiC";i:12;s:176:"Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)";i:13;s:8:"LBL_2674";i:14;s:11:"Single gene";i:15;s:7:"1884307";i:16;s:14:"LBL_2674(thiC)";i:17;s:98:"thiamine biosynthetic process [GO:0009228]; thiamine diphosphate biosynthetic process [GO:0009229]";i:18;s:15:"View Structure ";}}
