Genome: Shigella flexneri 5 str. 8401 (NC_008258.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 73021-73120 (-)TPP72006-72990 (-)tbpA

Thiamin-binding periplasmic protein		SFV_0060Operon

DOOR ID: 208231		SFV_0058 (thiQ),
SFV_0059 (thiP),
SFV_0060 (tbpA)		 View Structure
2 795717-795862 (+)MOCO796860-797373 (+)moaB

Molybdenum cofactor biosynthesis protein B		SFV_0765Operon

DOOR ID: 208367		SFV_0764 (moaA),
SFV_0765 (moaB),
SFV_0766 (moaC),
SFV_0767 (moaD),
SFV_0768 (moaE)		 View Structure
3 1454504-1454605 (-)yybP-ykoY1452999-1453809 (+)rrmA

Putative enzyme		SFV_1406Single gene

DOOR ID: 1838442		SFV_1406 (rrmA) View Structure
4 1903964-1904012 (+)mini-ykkC1904026-1904341 (+)Shewmr4_1608

Shewmr4_1608Single gene

DOOR ID: 1859602		Shewmr4_1608 View Structure
5 2193141-2193237 (-)TPP2192317-2193106 (-)thiM

Hydroxyethylthiazole kinase (0) (4-methyl-5-beta-hydroxyethylthiazole kinase) (TH kinase) (Thz kinase)		SFV_2159Operon

DOOR ID: 208601		SFV_2156 (yegW),
SFV_2157 (yegX),
SFV_2158 (thiD),
SFV_2159 (thiM)		 View Structure
6 3151447-3151595 (-)FMN3150689-3151343 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)		SFV_3085Single gene

DOOR ID: 1839121		SFV_3085 (ribB) View Structure
7 4154580-4154770 (+)cobalamin4154834-4156679 (+)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)		SFV_4039Operon

DOOR ID: 208976		SFV_4039 (btuB),
SFV_4040 (murI)		 View Structure
8 4186197-4186297 (-)TPP4184220-4186116 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		SFV_4066Operon

DOOR ID: 208981		SFV_4061 (thiH),
SFV_4063 (thiG),
SFV_4062 (thiS),
SFV_4064 (thiF),
SFV_4065 (thiE),
SFV_4066 (thiC)		 View Structure
9 4327559-4327755 (+)lysine4327846-4329196 (+)lysC

Aspartokinase 		SFV_4189Single gene

DOOR ID: 1839518		SFV_4189 (lysC) View Structure
10 4388169-4388284 (-)Mg sensor4385378-4388075 (-)mgtA

Mg2+ transport ATPase; P-type 1		SFV_4250Single gene

DOOR ID: 1839549		SFV_4250 (mgtA) View Structure