Genome: Pseudomonas syringae pv. syringae B728a (NC_007005.1); Phylum: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 499613-499723 (-)SAH498179-499589 (-)Psyr_0460

Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)		Psyr_0460Single gene

DOOR ID: 1663877		Psyr_0460 View Structure
2 614914-615018 (+)TPP615172-617062 (+)Psyr_0544

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		Psyr_0544Single gene

DOOR ID: 1663910		Psyr_0544 View Structure
3 1116241-1116434 (-)yybP-ykoY1115642-1116227 (-)Psyr_0985

Psyr_0985Single gene

DOOR ID: 1664046		Psyr_0985 View Structure
4 1675082-1675154 (-)fluoride1673654-1675001 (-)Psyr_1486

Cl-channel; voltage gated		Psyr_1486Operon

DOOR ID: 128315		Psyr_1485,
Psyr_1486		 View Structure
5 1958649-1958813 (-)yybP-ykoY1958068-1958605 (-)Psyr_1725

Putative manganese efflux pump MntP		Psyr_1725Single gene

DOOR ID: 1664328		Psyr_1725 View Structure
6 2645076-2645193 (-)SAH2643671-2644997 (+)Psyr_2277

Ammonium transporter		Psyr_2277Single gene

DOOR ID: 1664590		Psyr_2277 View Structure
7 3613489-3613713 (-)cobalamin3612305-3613370 (-)Psyr_3016

Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K		Psyr_3016Operon

DOOR ID: 128587		Psyr_3014,
Psyr_3015 (cobN),
Psyr_3016		 View Structure
8 3613772-3613987 (+)cobalamin3614085-3614268 (+)Psyr_3017

Psyr_3017Operon

DOOR ID: 128588		Psyr_3017,
Psyr_3018,
Psyr_3019,
Psyr_3020		 View Structure
9 3709306-3709505 (+)cobalamin3709634-3710648 (+)Psyr_3094

Periplasmic binding protein		Psyr_3094Operon

DOOR ID: 128603		Psyr_3094,
Psyr_3095,
Psyr_3096,
Psyr_3097		 View Structure
10 4239088-4239253 (+)FMN4239379-4239892 (+)ribH

6;7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (LS) (Lumazine synthase) (8)		Psyr_3558Single gene

DOOR ID: 1665112		Psyr_3558 (ribH) View Structure
11 4368008-4368222 (-)cobalamin4367305-4367917 (-)Psyr_3681

Cob(I)yrinic acid a;c-diamide adenosyltransferase (7) (Cob(I)alamin adenosyltransferase) (Corrinoid adenosyltransferase)		Psyr_3681Operon

DOOR ID: 128707		Psyr_3672 (cobS),
Psyr_3673,
Psyr_3674 (cobT),
Psyr_3675 (cobU),
Psyr_3676,
Psyr_3677,
Psyr_3678 (cobD),
Psyr_3679,
Psyr_3680,
Psyr_3681		 View Structure
12 4719777-4719879 (+)ykkC-yxkD4719942-4721010 (+)Psyr_3972

ABC transporter; periplasmic substrate-binding protein		Psyr_3972Operon

DOOR ID: 128762		Psyr_3972,
Psyr_3973,
Psyr_3974,
Psyr_3975,
Psyr_3976		 View Structure
13 4724000-4724047 (+)mini-ykkC4724092-4728559 (+)Psyr_3977

Psyr_3977Operon

DOOR ID: 128763		Psyr_3977,
Psyr_3978		 View Structure