Genome: Lactobacillus acidophilus NCFM (NC_006814.3); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 110004-110177 (-)lysine108279-109908 (-)LBA0112

Putative glutamine ABC transporter
LBA0112Operon

DOOR ID: 123307
LBA0111,
LBA0112
View Structure
2 206473-206636 (+)ykoK206707-209382 (+)LBA0212

Cation transporter P-ATPase
LBA0212Operon

DOOR ID: 123328
LBA0212,
LBA0213,
LBA0214,
LBA0215,
LBA0216 (ksgA)
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3 237626-237723 (-)purine236971-237562 (-)LBA0240

Xanthine phosphoribosyltransferase (XPRTase) (2)
LBA0240Operon

DOOR ID: 123337
LBA0239,
LBA0240
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4 563417-563507 (+)TPP563545-564136 (+)LBA0576

LBA0576Single gene

DOOR ID: 1653314
LBA0576 View Structure
5 834692-834862 (+)lysine834939-836260 (+)lysA

Diaminopimelate decarboxylase (DAP decarboxylase) (DAPDC) (0)
LBA0851Operon

DOOR ID: 123461
LBA0851 (lysA),
LBA0852 (dapD),
LBA0853,
LBA0854,
LBA0855 (dapB),
LBA0856,
LBA0857
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6 939721-939833 (+)FMN939897-940603 (+)LBA0965

Riboflavin transporter
LBA0965Single gene

DOOR ID: 1653428
LBA0965 View Structure
7 965933-965991 (+)fluoride966019-966423 (+)crcB

Putative fluoride ion transporter CrcB 1
LBA0992Operon

DOOR ID: 123486
LBA0992 (crcB),
LBA0993 (crcB)
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8 1626447-1626537 (-)SMK_box1623769-1625241 (-)LBA1621

Multidrug transporter
LBA1621Operon

DOOR ID: 123605
LBA1621,
LBA1622 (metK)
View Structure