Genome: Vibrio vulnificus YJ016 (NC_005139.1); Taxonomy: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 2327906-2327994 (+)c-di-GMP-I2328109-2328703 (+)VV2306

Uncharacterized protein		VV2306operon

DOOR ID: 91257		VV2306,
VV2307,
VV2308,
VV2309		 View Structure
2 624493-624584 (-)c-di-GMP-I622896-624354 (-)VVA0551

GlcNAc-binding protein A		VVA0551single gene

DOOR ID: 1588878		VVA0551 View Structure
3 173174-173487 (+)cobalamin173538-175380 (+)VV0166

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)		VV0166Operon

DOOR ID: 90864		VV0166,
VV0167,
VV0168		 View Structure
4 298374-298514 (-)FMN297620-298277 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)		VVA0260Single gene

DOOR ID: 1588724		VVA0260 View Structure
5 1639249-1639348 (-)glycine1637734-1639111 (-)VV1595

Sodium/alanine symporter		VV1595Single gene

DOOR ID: 1587829		VV1595 View Structure
6 1373591-1373770 (+)lysine1373827-1373947 (-)VV1348

VV1348Single gene

DOOR ID: 1587720		VV1348 View Structure
7 3027782-3027960 (+)lysine3028080-3029430 (+)VV2959

Aspartokinase 		VV2959Single gene

DOOR ID: 1587232		VV2959 View Structure
8 1214618-1214768 (+)MOCO1215826-1216339 (+)VV1199

Molybdenum cofactor biosynthesis protein B		VV1199Operon

DOOR ID: 91069		VV1198,
VV1199,
VV1200,
VV1201,
VV1202		 View Structure
9 1130553-1130652 (+)purine1130675-1131671 (+)VVA1020

Adenosine deaminase (Adenosine aminohydrolase)		VVA1020Single gene

DOOR ID: 1589084		VVA1020 View Structure
10 303597-303695 (-)TPP302668-303508 (-)VVA0267

Phosphomethylpyrimidine kinase		VVA0267Single gene

DOOR ID: 1588731		VVA0267 View Structure
11 3296260-3296358 (-)TPP3294169-3296113 (-)VV3207

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		VV3207Operon

DOOR ID: 91424		VV3202,
VV3203,
VV3204,
VV3205,
VV3206,
VV3207		 View Structure
12 427793-427918 (+)TPP427984-428992 (+)tbpA

Thiamine ABC transporter; periplasmic thiamin-binding protein		VV0437Operon

DOOR ID: 90909		VV0437,
VV0438,
VV0439		 View Structure
13 1183685-1183793 (-)yybP-ykoY1182515-1183484 (-)VVA1055

VVA1055Single gene

DOOR ID: 1589090		VVA1055 View Structure
14 21939-22053 (+)yybP-ykoY22143-22698 (+)VV0022

Predicted membrane protein		VV0022Single gene

DOOR ID: 1587242		VV0022 View Structure