RiboswitchDB

Genome: Vibrio vulnificus MO6-24/O (NC_014966.1); Taxonomy: Gammaproteobacteria

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

1123149-1123237 (-)

c-di-GMP-I

1122439-1123033 (-)

VVMO6_01005

single gene

DOOR ID: 3044194

VVM_01971

2

602550-602641 (-)

c-di-GMP-I

600953-602411 (-)

VVMO6_03494

single gene

DOOR ID: 3045348

VVM_01054

3

2002293-2002472 (-)

lysine

2000584-2002186 (-)

VVMO6_01865

Single gene

DOOR ID: 3044599

VVM_03447

4

396828-397006 (-)

lysine

395357-396707 (-)

VVMO6_00354

Single gene

DOOR ID: 3043943

VVM_00680

5

2169149-2169299 (-)

MOCO

2167577-2168090 (-)

VVMO6_02019

Operon

DOOR ID: 802382

VVM_03598,
VVM_03599,
VVM_03600,
VVM_03601,
VVM_03602

6

1105073-1105172 (+)

purine

1105195-1106191 (+)

VVMO6_03937

Single gene

DOOR ID: 3045546

VVM_01945

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