Genome: Vibrio vulnificus CMCP6 (NC_004459.3); Taxonomy: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 2137998-2138086 (-)c-di-GMP-I2137288-2137882 (-)VV1_2136

VV1_2136single gene

DOOR ID: 1534049		VV1_2136 View Structure
2 45881-45972 (-)c-di-GMP-I44284-45742 (-)VV2_0044

GlcNAc-binding protein A		VV2_0044single gene

DOOR ID: 1534702		VV2_0044 View Structure
3 1165696-1165894 (+)cobalamin1165945-1167766 (+)VV1_1173

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)		VV1_1173Single gene

DOOR ID: 1533773		VV1_1173 View Structure
4 1571980-1572120 (-)FMN1571226-1571883 (-)VV2_1426

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)		VV2_1426Single gene

DOOR ID: 1535236		VV2_1426 View Structure
5 2743882-2743981 (+)glycine2744118-2745495 (+)VV1_2695

VV1_2695Single gene

DOOR ID: 1534283		VV1_2695 View Structure
6 1404650-1404828 (-)lysine1399417-1403098 (+)metH

Methionine synthase (3) (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase; vitamin-B12 dependent) (MS)		VV1_1423Single gene

DOOR ID: 1533851		VV1_1423 View Structure
7 2989149-2989328 (-)lysine2987440-2989042 (-)VV1_2922

VV1_2922Single gene

DOOR ID: 1534658		VV1_2922 View Structure
8 3155932-3156082 (-)MOCO3154360-3154873 (-)moaB

VV1_3087Operon

DOOR ID: 74582		VV1_3084,
VV1_3085,
VV1_3086,
VV1_3087,
VV1_3088		 View Structure
9 504363-504462 (+)purine504485-505481 (+)add

Adenosine deaminase (Adenosine aminohydrolase)		VV2_0468Single gene

DOOR ID: 1534847		VV2_0468 View Structure
10 1577203-1577301 (-)TPP1576274-1577114 (-)VV2_1433

VV2_1433Single gene

DOOR ID: 1535243		VV2_1433 View Structure
11 721758-721883 (-)TPP720683-721712 (-)thiB

VV1_0703Operon

DOOR ID: 74205		VV1_0701,
VV1_0702,
VV1_0703		 View Structure
12 971114-971212 (-)TPP969023-970967 (-)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		VV1_0964Operon

DOOR ID: 74247		VV1_0959,
VV1_0960,
VV1_0961,
VV1_0962,
VV1_0963,
VV1_0964		 View Structure
13 559536-559644 (-)yybP-ykoY558366-559335 (-)VV2_0505

VV2_0505Single gene

DOOR ID: 1534854		VV2_0505 View Structure
14 990606-990720 (-)yybP-ykoY989960-990515 (-)VV1_0988

VV1_0988Single gene

DOOR ID: 1533723		VV1_0988 View Structure