Genome: Vibrio sp. EJY3 (NC_016613.1); Taxonomy: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 1089295-1089383 (-)c-di-GMP-I1088587-1089178 (-)VEJY3_04780

Uncharacterized protein		VEJY3_04780single gene

DOOR ID: 3338335		VEJY3_04780 View Structure
2 1866513-1866597 (-)c-di-GMP-I1864670-1866242 (-)VEJY3_24001

Levansucrase		VEJY3_24001operon

DOOR ID: 948534		VEJY3_23996,
VEJY3_24001		 View Structure
3 3337369-3337573 (-)cobalamin3335475-3337311 (-)VEJY3_14850

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)		VEJY3_14850Single gene

DOOR ID: 3339210		VEJY3_14850 View Structure
4 355916-356056 (-)FMN355144-355801 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)		VEJY3_17426Operon

DOOR ID: 948260		VEJY3_17416,
VEJY3_17421,
VEJY3_17426		 View Structure
5 1821254-1821354 (+)glycine1821469-1822843 (+)VEJY3_08150

Sodium/alanine symporter		VEJY3_08150Single gene

DOOR ID: 3338626		VEJY3_08150 View Structure
6 1246418-1246598 (+)lysine1246707-1248309 (+)VEJY3_05540

VEJY3_05540Single gene

DOOR ID: 3338392		VEJY3_05540 View Structure
7 3108748-3108926 (+)lysine3109025-3110378 (+)VEJY3_13915

Aspartokinase 		VEJY3_13915Single gene

DOOR ID: 3339118		VEJY3_13915 View Structure
8 2424078-2424215 (-)MOCO2422486-2422999 (-)VEJY3_10885

Molybdenum cofactor biosynthesis protein B		VEJY3_10885Operon

DOOR ID: 1323755		VEJY3_10870,
VEJY3_10875,
VEJY3_10880,
VEJY3_10885		 View Structure
9 342962-343061 (-)purine341858-342872 (-)VEJY3_17341

Adenine deaminase (ADE) (Adenine aminohydrolase) (AAH)		VEJY3_17341Operon

DOOR ID: 948255		VEJY3_17336,
VEJY3_17341		 View Structure
10 334173-334321 (+)TPP334392-335385 (+)tbpA

Thiamine transporter substrate binding subunit		VEJY3_01555Operon

DOOR ID: 1323405		VEJY3_01565,
VEJY3_01560,
VEJY3_01555		 View Structure
11 3423070-3423168 (-)TPP3420978-3422919 (-)VEJY3_15250

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		VEJY3_15250Operon

DOOR ID: 1323918		VEJY3_15225,
VEJY3_15230,
VEJY3_15235,
VEJY3_15240,
VEJY3_15245,
VEJY3_15250		 View Structure
12 82942-83049 (-)TPP81985-82843 (-)VEJY3_16211

Bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase 		VEJY3_16211Operon

DOOR ID: 948208		VEJY3_16181,
VEJY3_16186,
VEJY3_16191,
VEJY3_16196,
VEJY3_16201,
VEJY3_16206,
VEJY3_16211		 View Structure
13 1114232-1114393 (-)yybP-ykoY1112713-1113682 (-)VEJY3_20751

Inner membrane protein YrbG		VEJY3_20751Operon

DOOR ID: 948401		VEJY3_20716,
VEJY3_20721,
VEJY3_20726,
VEJY3_20731,
VEJY3_20736,
VEJY3_20741,
VEJY3_20746,
VEJY3_20751		 View Structure
14 23387-23501 (+)yybP-ykoY23594-24149 (+)VEJY3_00105

VEJY3_00105Single gene

DOOR ID: 3337958		VEJY3_00105 View Structure