Genome: Vibrio harveyi ATCC BAA-1116 (NC_009783.1); Taxonomy: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 1587993-1588082 (-)c-di-GMP-I1587285-1587876 (-)VIBHAR_01580

Uncharacterized protein		VIBHAR_01580single gene

DOOR ID: 2126360		VIBHAR_01580 View Structure
2 253548-253749 (-)cobalamin251636-253490 (-)VIBHAR_00261

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)		VIBHAR_00261Single gene

DOOR ID: 2125800		VIBHAR_00261 View Structure
3 3337036-3337110 (+)fluoride3337340-3338063 (+)VIBHAR_03307

VIBHAR_03307Operon

DOOR ID: 349572		VIBHAR_03307,
VIBHAR_03308		 View Structure
4 545831-545971 (-)FMN545000-545657 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)		VIBHAR_05311Single gene

DOOR ID: 2127609		VIBHAR_05311 View Structure
5 2485238-2485339 (+)glycine2485455-2486832 (+)VIBHAR_02469

VIBHAR_02469Single gene

DOOR ID: 2126752		VIBHAR_02469 View Structure
6 1841850-1842030 (+)lysine1842139-1843741 (+)VIBHAR_01828

VIBHAR_01828Single gene

DOOR ID: 2126461		VIBHAR_01828 View Structure
7 3751076-3751254 (+)lysine3751377-3752730 (+)VIBHAR_03711

Aspartokinase 		VIBHAR_03711Single gene

DOOR ID: 2127305		VIBHAR_03711 View Structure
8 2978035-2978168 (-)MOCO2976444-2976957 (-)VIBHAR_02953

Molybdenum cofactor biosynthesis protein B		VIBHAR_02953Operon

DOOR ID: 349508		VIBHAR_02950,
VIBHAR_02951,
VIBHAR_02952,
VIBHAR_02953,
VIBHAR_02954		 View Structure
9 1582523-1582622 (+)purine1582722-1583730 (+)VIBHAR_06421

Adenine deaminase (ADE) (Adenine aminohydrolase) (AAH)		VIBHAR_06421Single gene

DOOR ID: 2128173		VIBHAR_06421 View Structure
10 1949765-1949875 (+)TPP1949983-1950871 (+)VIBHAR_06838

VIBHAR_06838Operon

DOOR ID: 349999		VIBHAR_06838,
VIBHAR_06839,
VIBHAR_06840,
VIBHAR_06841,
VIBHAR_06842,
VIBHAR_06843,
VIBHAR_06844		 View Structure
11 354753-354851 (-)TPP352646-354587 (-)VIBHAR_00366

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		VIBHAR_00366Operon

DOOR ID: 349043		VIBHAR_00361,
VIBHAR_00362,
VIBHAR_00363,
VIBHAR_00364,
VIBHAR_00365,
VIBHAR_00366		 View Structure
12 770477-770626 (+)TPP770694-771687 (+)tbpA

VIBHAR_00788Operon

DOOR ID: 349113		VIBHAR_00788,
VIBHAR_00789,
VIBHAR_00790		 View Structure
13 437152-437267 (+)yybP-ykoY437359-437914 (+)VIBHAR_00451

VIBHAR_00451Single gene

DOOR ID: 2125874		VIBHAR_00451 View Structure