Genome: Vibrio cholerae M66-2 (NC_012578.1); Taxonomy: Gammaproteobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 1807824-1807910 (+)c-di-GMP-I1808023-1808611 (+)VCM66_1662

Uncharacterized protein		VCM66_1662single gene

DOOR ID: 2548971		VCM66_1662 View Structure
2 729240-729346 (+)c-di-GMP-I729463-730921 (+)VCM66_A0770

GlcNAc-binding protein A		VCM66_A0770single gene

DOOR ID: 2549840		VCM66_A0770 View Structure
3 145094-145297 (+)cobalamin145340-147176 (+)btuB

Vitamin B12 transporter BtuB (Cobalamin receptor) (Outer membrane cobalamin translocator)		VCM66_0155Single gene

DOOR ID: 2548385		VCM66_0155 View Structure
4 985517-985655 (-)FMN984745-985402 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)		VCM66_A1018Single gene

DOOR ID: 2549974		VCM66_A1018 View Structure
5 1477868-1477967 (-)glycine1476398-1477775 (-)VCM66_1377

Sodium/alanine symporter		VCM66_1377Single gene

DOOR ID: 2548872		VCM66_1377 View Structure
6 1156408-1156590 (+)lysine1156705-1158307 (+)VCM66_1087

Putative membrane protein		VCM66_1087Single gene

DOOR ID: 2548737		VCM66_1087 View Structure
7 232051-232223 (-)lysine230391-231981 (-)VCM66_A0209

VCM66_A0209Single gene

DOOR ID: 2549551		VCM66_A0209 View Structure
8 398983-399160 (-)lysine397516-398956 (-)lysC

Aspartokinase 		VCM66_0376Single gene

DOOR ID: 2548459		VCM66_0376 View Structure
9 1050455-1050594 (+)MOCO1051631-1052144 (+)moaB

Molybdenum cofactor biosynthesis protein B		VCM66_0980Operon

DOOR ID: 550016		VCM66_0979,
VCM66_0980,
VCM66_0981,
VCM66_0982,
VCM66_0983		 View Structure
10 1332349-1332459 (+)TPP1332518-1333367 (+)thiD

Phosphomethylpyrimidine kinase 		VCM66_1251Single gene

DOOR ID: 2548815		VCM66_1251 View Structure
11 2659438-2659575 (-)TPP2658381-2659374 (-)tbpA

Thiamin ABC transporter; periplasmic thiamin-binding protein		VCM66_2460Operon

DOOR ID: 550304		VCM66_2458,
VCM66_2459,
VCM66_2460,
VCM66_2461,
VCM66_2462,
VCM66_2463		 View Structure
12 59754-59852 (+)TPP59952-61890 (+)thiC

Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)		VCM66_0061Operon

DOOR ID: 549837		VCM66_0061,
VCM66_0062,
VCM66_0063,
VCM66_0064,
VCM66_0065,
VCM66_0066		 View Structure
13 1733832-1734001 (+)ykoK1734100-1735456 (+)mgtE-1

Magnesium transporter MgtE		VCM66_1594Single gene

DOOR ID: 2548945		VCM66_1594 View Structure
14 20081-20190 (+)yybP-ykoY20234-20837 (+)VCM66_0022

VCM66_0022Single gene

DOOR ID: 2548333		VCM66_0022 View Structure