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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
1338074-1338333
(-)
cobalamin
1335587-1337984 (-)
PG1260
PG1260
Operon
DOOR ID:
33850
PG1259,
PG1260
View Structure
2
1495774-1495987
(-)
cobalamin
1493570-1495256 (-)
PG1411
PG1411
Single gene
DOOR ID:
1437731
PG1411
View Structure
3
701523-701725
(-)
cobalamin
700199-701375 (-)
PG0648
PG0648
Operon
DOOR ID:
33724
PG0646,
PG0647,
PG0648
View Structure
4
717154-717394
(+)
cobalamin
717590-719864 (+)
PG0668
PG0668
Operon
DOOR ID:
33728
PG0668,
PG0669
View Structure
5
749392-749595
(-)
cobalamin
747631-749092 (-)
abfD
PG0692
Single gene
DOOR ID:
1437511
PG0692
View Structure
6
1999744-1999857
(-)
TPP
1996816-1997425 (-)
PG1898
PG1898
Operon
DOOR ID:
33971
PG1897,
PG1898,
PG1899
View Structure
7
2221664-2221774
(-)
TPP
2221371-2221572 (-)
thiS
PG2111
Single gene
DOOR ID:
1437915
PG2111
View Structure
Genome:
Porphyromonas gingivalis W83
(
NC_002950.2
);
Taxonomy:
Bacteroidetes/Chlorobi group
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