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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
1291154-1291391
(-)
cobalamin
1290914-1291103 (-)
cbtB
Cobalt transporter subunit CbtB (Proposed)
BSUIS_A1360
Operon
DOOR ID:
382291
BSUIS_A1354,
BSUIS_A1355,
BSUIS_A1356,
BSUIS_A1357,
BSUIS_A1358,
BSUIS_A1359,
BSUIS_A1360
View Structure
2
1329539-1329767
(-)
cobalamin
1327519-1329382 (-)
BSUIS_A1398
TonB-dependent receptor
BSUIS_A1398
Operon
DOOR ID:
382296
BSUIS_A1395,
BSUIS_A1396,
BSUIS_A1397,
BSUIS_A1398
View Structure
3
298859-299072
(+)
cobalamin
299423-299645 (+)
nrdH
Glutaredoxin-like protein NrdH
BSUIS_B0320
Operon
DOOR ID:
381019
BSUIS_B0320,
BSUIS_B0321,
BSUIS_B0322,
BSUIS_B0323
View Structure
4
726245-726477
(-)
cobalamin
725010-726045 (-)
BSUIS_B0747
BSUIS_B0747
Operon
DOOR ID:
381098
BSUIS_B0746,
BSUIS_B0747,
BSUIS_B0748
View Structure
5
661165-661328
(+)
FMN
661404-661881 (+)
BSUIS_B0680
6;7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (LS) (Lumazine synthase) (8)
BSUIS_B0680
Single gene
DOOR ID:
2198473
BSUIS_B0680
View Structure
6
1190052-1190098
(+)
glutamine
1190261-1191698 (-)
pyk
Pyruvate kinase (0)
BSUIS_B1224
Operon
DOOR ID:
381184
BSUIS_B1224,
BSUIS_B1225
View Structure
7
701215-701299
(-)
glycine
699963-701067 (-)
gcvT
Glycine cleavage system T protein
BSUIS_B0717
Operon
DOOR ID:
381092
BSUIS_B0715,
BSUIS_B0716,
BSUIS_B0717
View Structure
8
335606-335685
(-)
sam-alpha
335504-335600 (-)
BSUIS_A0332
BSUIS_A0332
Single gene
DOOR ID:
2200092
BSUIS_A0332
View Structure
9
1196874-1197044
(+)
TPP
1197085-1198090 (+)
tbpA
Thiamin/thiamin pyrophosphate ABC transporter; thiamin/thiamin pyrophospate-binding protein
BSUIS_B1234
Operon
DOOR ID:
381187
BSUIS_B1234,
BSUIS_B1235,
BSUIS_B1236
View Structure
10
224726-224832
(-)
TPP
223763-224639 (-)
thiD
Phosphomethylpyrimidine kinase
BSUIS_A0217
Operon
DOOR ID:
382071
BSUIS_A0210,
BSUIS_A0211,
BSUIS_A0212,
BSUIS_A0213,
BSUIS_A0214,
BSUIS_A0215,
BSUIS_A0216,
BSUIS_A0217
View Structure
Genome:
Brucella suis ATCC 23445
(
NC_010169.1
);
Taxonomy:
Alphaproteobacteria
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BSUIS_B1225";i:17;s:1:" ";i:18;N;}i:7;a:19:{i:0;i:7;i:1;s:11:"NC_010167.1";i:2;s:25:"Brucella suis ATCC 23445 ";i:3;s:19:"Alphaproteobacteria";i:4;s:5:"28211";i:5;s:13:"701215-701299";i:6;s:1:"-";i:7;s:7:"glycine";i:8;s:0:"";i:9;s:13:"699963-701067";i:10;s:1:"-";i:11;s:4:"gcvT";i:12;s:33:"Glycine cleavage system T protein";i:13;s:11:"BSUIS_B0717";i:14;s:6:"Operon";i:15;s:6:"381092";i:16;s:37:"BSUIS_B0715; BSUIS_B0716; BSUIS_B0717";i:17;s:39:"glycine catabolic process [GO:0006546] ";i:18;N;}i:8;a:19:{i:0;i:8;i:1;s:11:"NC_010169.1";i:2;s:25:"Brucella suis ATCC 23445 ";i:3;s:19:"Alphaproteobacteria";i:4;s:5:"28211";i:5;s:13:"335606-335685";i:6;s:1:"-";i:7;s:9:"sam-alpha";i:8;s:0:"";i:9;s:13:"335504-335600";i:10;s:1:"-";i:11;s:11:"BSUIS_A0332";i:12;s:0:"";i:13;s:11:"BSUIS_A0332";i:14;s:11:"Single gene";i:15;s:7:"2200092";i:16;s:11:"BSUIS_A0332";i:17;s:1:" ";i:18;N;}i:9;a:19:{i:0;i:9;i:1;s:11:"NC_010167.1";i:2;s:25:"Brucella suis ATCC 23445 ";i:3;s:19:"Alphaproteobacteria";i:4;s:5:"28211";i:5;s:15:"1196874-1197044";i:6;s:1:"+";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:15:"1197085-1198090";i:10;s:1:"+";i:11;s:4:"tbpA";i:12;s:91:"Thiamin/thiamin pyrophosphate ABC transporter; 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