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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
1276947-1277184
(-)
cobalamin
1275902-1276619 (-)
BOV_1272
Putative membrane protein
BOV_1272
Operon
DOOR ID:
313523
BOV_1266,
BOV_1268,
BOV_1269,
BOV_1270,
BOV_1271,
BOV_1272,
BOV_1273
View Structure
2
1315271-1315499
(-)
cobalamin
1312398-1313238 (-)
BOV_1305
Iron compound ABC transporter; periplasmic iron compound-binding protein
BOV_1305
Operon
DOOR ID:
313527
BOV_1302,
BOV_1304,
BOV_1305,
BOV_1306
View Structure
3
296886-297099
(+)
cobalamin
297324-297672 (+)
nrdH
Glutaredoxin-like protein nrdH
BOV_A0290
Operon
DOOR ID:
313153
BOV_A0290,
BOV_A0291,
BOV_A0292,
BOV_A0293
View Structure
4
739587-739819
(-)
cobalamin
738352-739387 (-)
BOV_A0705
Iron compound ABC transporter; periplasmic iron compound-binding protein
BOV_A0705
Operon
DOOR ID:
313223
BOV_A0703,
BOV_A0704,
BOV_A0705
View Structure
5
675393-675556
(+)
FMN
675632-676109 (+)
ribH-2
6;7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (LS) (Lumazine synthase) (8)
BOV_A0649
Single gene
DOOR ID:
2055297
BOV_A0649
View Structure
6
1688751-1688797
(+)
glutamine
1688960-1690397 (-)
pyk
Pyruvate kinase (0)
BOV_1688
Operon
DOOR ID:
313592
BOV_1688,
BOV_1689
View Structure
7
714549-714633
(-)
glycine
713298-714402 (-)
gcvT
Glycine cleavage system T protein (0)
BOV_A0681
Operon
DOOR ID:
313218
BOV_A0679,
BOV_A0680,
BOV_A0681
View Structure
8
338887-338966
(-)
sam-alpha
338785-338881 (-)
BOV_0319
BOV_0319
Operon
DOOR ID:
313346
BOV_0318,
BOV_0319
View Structure
9
1695573-1695743
(+)
TPP
1695784-1696789 (+)
tbpA
Thiamin/thiamin pyrophosphate ABC transporter; thiamin/thiamin pyrophospate-binding protein
BOV_1695
Single gene
DOOR ID:
2055787
BOV_1695
View Structure
10
228086-228192
(-)
TPP
227123-228038 (-)
thiD
Phosphomethylpyrimidine kinase
BOV_0209
Operon
DOOR ID:
313326
BOV_0202,
BOV_0203,
BOV_0204,
BOV_0205,
BOV_0206,
BOV_0207,
BOV_0208,
BOV_0209
View Structure
Genome:
Brucella ovis ATCC 25840
(
NC_009505.1
);
Taxonomy:
Alphaproteobacteria
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periplasmic iron compound-binding protein";i:13;s:8:"BOV_1305";i:14;s:6:"Operon";i:15;s:6:"313527";i:16;s:38:"BOV_1302; BOV_1304; BOV_1305; BOV_1306";i:17;s:1:" ";i:18;N;}i:3;a:19:{i:0;i:3;i:1;s:11:"NC_009504.1";i:2;s:25:"Brucella ovis ATCC 25840 ";i:3;s:19:"Alphaproteobacteria";i:4;s:5:"28211";i:5;s:13:"296886-297099";i:6;s:1:"+";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"297324-297672";i:10;s:1:"+";i:11;s:4:"nrdH";i:12;s:30:"Glutaredoxin-like protein nrdH";i:13;s:9:"BOV_A0290";i:14;s:6:"Operon";i:15;s:6:"313153";i:16;s:42:"BOV_A0290; BOV_A0291; BOV_A0292; BOV_A0293";i:17;s:36:"cell redox homeostasis [GO:0045454] ";i:18;N;}i:4;a:19:{i:0;i:4;i:1;s:11:"NC_009504.1";i:2;s:25:"Brucella ovis ATCC 25840 ";i:3;s:19:"Alphaproteobacteria";i:4;s:5:"28211";i:5;s:13:"739587-739819";i:6;s:1:"-";i:7;s:9:"cobalamin";i:8;s:0:"";i:9;s:13:"738352-739387";i:10;s:1:"-";i:11;s:9:"BOV_A0705";i:12;s:72:"Iron compound ABC transporter; periplasmic iron compound-binding protein";i:13;s:9:"BOV_A0705";i:14;s:6:"Operon";i:15;s:6:"313223";i:16;s:31:"BOV_A0703; 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BOV_0203; BOV_0204; BOV_0205; BOV_0206; BOV_0207; BOV_0208; BOV_0209";i:17;s:43:"thiamine biosynthetic process [GO:0009228] ";i:18;N;}}
