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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
1324184-1324412
(-)
cobalamin
1321311-1322151 (-)
BAB1_1366
Periplasmic binding protein
BAB1_1366
Operon
DOOR ID:
159696
BAB1_1364,
BAB1_1365,
BAB1_1366,
BAB1_1367
View Structure
2
478504-478736
(+)
cobalamin
478935-479970 (+)
BAB2_0483
Periplasmic binding protein
BAB2_0483
Operon
DOOR ID:
160420
BAB2_0482,
BAB2_0483,
BAB2_0484,
BAB2_0485
View Structure
3
873899-874112
(-)
cobalamin
873325-873547 (-)
nrdH
Glutaredoxin
BAB2_0891
Operon
DOOR ID:
160489
BAB2_0888,
BAB2_0889,
BAB2_0890,
BAB2_0891
View Structure
4
542916-543079
(-)
FMN
541552-542362 (+)
BAB2_0544
Sulfur carrier protein FdhD
BAB2_0544
Single gene
DOOR ID:
1733335
BAB2_0544
View Structure
5
1696227-1696273
(+)
glutamine
1696436-1697873 (-)
pyk
Pyruvate kinase (0)
BAB1_1761
Operon
DOOR ID:
159771
BAB1_1761,
BAB1_1762
View Structure
6
503728-503812
(+)
glycine
505059-505437 (+)
gcvH
Glycine cleavage system H protein
BAB2_0514
Operon
DOOR ID:
160425
BAB2_0513,
BAB2_0514,
BAB2_0515
View Structure
7
336342-336421
(-)
sam-alpha
335054-336251 (-)
metZ
O-succinylhomoserine sulfhydrylase (OSH sulfhydrylase) (OSHS sulfhydrylase)
BAB1_0335
Single gene
DOOR ID:
1731310
BAB1_0335
View Structure
8
1703050-1703220
(+)
TPP
1704262-1705894 (+)
thiP
Thiamine transport system permease protein ThiP
BAB1_1771
Operon
DOOR ID:
159773
BAB1_1770,
BAB1_1771,
BAB1_1772
View Structure
9
225870-225976
(-)
TPP
223903-224908 (-)
BAB1_0218
Mercuric reductase:Flavin-containing monooxygenase FMO:Pyridine nucleotide-disulphide oxidoreductase; class I:TrkA potassium
BAB1_0218
Operon
DOOR ID:
159492
BAB1_0212,
BAB1_0213,
BAB1_0214,
BAB1_0215,
BAB1_0216,
BAB1_0217,
BAB1_0218,
BAB1_0219
View Structure
Genome:
Brucella melitensis biovar Abortus 2308
(
NC_007618.1
);
Taxonomy:
Alphaproteobacteria
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