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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
1290818-1291055
(-)
cobalamin
1290578-1290767 (-)
cbtB
Cobalt transporter; subunit CbtB
BMEA_A1357
Operon
DOOR ID:
537234
BMEA_A1351,
BMEA_A1352,
BMEA_A1353,
BMEA_A1354,
BMEA_A1355,
BMEA_A1356,
BMEA_A1357
View Structure
2
1329206-1329434
(-)
cobalamin
1327186-1329049 (-)
BMEA_A1394
TonB-dependent receptor
BMEA_A1394
Operon
DOOR ID:
537240
BMEA_A1391,
BMEA_A1392,
BMEA_A1393,
BMEA_A1394
View Structure
3
296980-297193
(+)
cobalamin
297544-297766 (+)
nrdH
Glutaredoxin-like protein NrdH
BMEA_B0314
Operon
DOOR ID:
537437
BMEA_B0314,
BMEA_B0315,
BMEA_B0316,
BMEA_B0317
View Structure
4
717519-717751
(-)
cobalamin
716284-717319 (-)
BMEA_B0733
Periplasmic binding protein
BMEA_B0733
Operon
DOOR ID:
537510
BMEA_B0731,
BMEA_B0732,
BMEA_B0733
View Structure
5
653186-653349
(+)
FMN
653425-653902 (+)
BMEA_B0667
6;7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (LS) (Lumazine synthase) (8)
BMEA_B0667
Single gene
DOOR ID:
2523256
BMEA_B0667
View Structure
6
1700929-1700975
(+)
glutamine
1701138-1702575 (-)
pyk
Pyruvate kinase (0)
BMEA_A1800
Operon
DOOR ID:
537308
BMEA_A1800,
BMEA_A1801
View Structure
7
692424-692508
(-)
glycine
691172-692276 (-)
gcvT
Glycine cleavage system T protein (0)
BMEA_B0703
Operon
DOOR ID:
537504
BMEA_B0701,
BMEA_B0702,
BMEA_B0703
View Structure
8
339026-339105
(-)
sam-alpha
337738-338935 (-)
metZ
O-succinylhomoserine sulfhydrylase (OSH sulfhydrylase) (OSHS sulfhydrylase)
BMEA_A0340
Single gene
DOOR ID:
2522199
BMEA_A0340
View Structure
9
1707751-1707921
(+)
TPP
1707962-1708967 (+)
thiB
Thiamin/thiamin pyrophosphate ABC transporter; thiamin/thiamin pyrophospate-binding protein
BMEA_A1810
Operon
DOOR ID:
537310
BMEA_A1810,
BMEA_A1811,
BMEA_A1812
View Structure
10
228057-228163
(-)
TPP
227094-227970 (-)
thiD
Phosphomethylpyrimidine kinase (7)
BMEA_A0225
Operon
DOOR ID:
537025
BMEA_A0219,
BMEA_A0220,
BMEA_A0221,
BMEA_A0222,
BMEA_A0223,
BMEA_A0224,
BMEA_A0225
View Structure
Genome:
Brucella melitensis ATCC 23457
(
NC_012441.1
);
Taxonomy:
Alphaproteobacteria
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homocysteine biosynthetic process [GO:0071268] ";i:18;N;}i:9;a:19:{i:0;i:9;i:1;s:11:"NC_012441.1";i:2;s:31:"Brucella melitensis ATCC 23457 ";i:3;s:19:"Alphaproteobacteria";i:4;s:5:"28211";i:5;s:15:"1707751-1707921";i:6;s:1:"+";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:15:"1707962-1708967";i:10;s:1:"+";i:11;s:4:"thiB";i:12;s:91:"Thiamin/thiamin pyrophosphate ABC transporter; thiamin/thiamin pyrophospate-binding protein";i:13;s:10:"BMEA_A1810";i:14;s:6:"Operon";i:15;s:6:"537310";i:16;s:34:"BMEA_A1810; BMEA_A1811; BMEA_A1812";i:17;s:32:"thiamine transport [GO:0015888] ";i:18;N;}i:10;a:19:{i:0;i:10;i:1;s:11:"NC_012441.1";i:2;s:31:"Brucella melitensis ATCC 23457 ";i:3;s:19:"Alphaproteobacteria";i:4;s:5:"28211";i:5;s:13:"228057-228163";i:6;s:1:"-";i:7;s:3:"TPP";i:8;s:0:"";i:9;s:13:"227094-227970";i:10;s:1:"-";i:11;s:4:"thiD";i:12;s:34:"Phosphomethylpyrimidine kinase (7)";i:13;s:10:"BMEA_A0225";i:14;s:6:"Operon";i:15;s:6:"537025";i:16;s:82:"BMEA_A0219; BMEA_A0220; BMEA_A0221; BMEA_A0222; BMEA_A0223; BMEA_A0224; 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