Genome: Streptomyces venezuelae ATCC 10712 (NC_018750.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 171814-172018 (+)cobalamin172057-173125 (+)SVEN_0164

ABC transporter (Iron.B12.siderophore.hemin); periplasmic substrate-binding component

DOOR ID: 1166707
View Structure
2 431399-431634 (+)cobalamin431662-432361 (+)SVEN_0405

Cobalt transport protein CbiM (Energy-coupling factor transporter probable substrate-capture protein CbiM) (ECF transporter S component CbiM)

DOOR ID: 1166758
View Structure
3 965772-965978 (+)ydaO-yuaA965981-966458 (+)SVEN_0841

Putative NLP or P60 family protein
SVEN_0841Single gene

DOOR ID: 3950407
SVEN_0841 View Structure
4 1091569-1091668 (-)glycine1088502-1091388 (-)SVEN_0962

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))
SVEN_0962Single gene

DOOR ID: 3950528
SVEN_0962 View Structure
5 1182966-1183095 (-)FMN1181108-1181717 (-)SVEN_1040

Riboflavin synthase alpha chain
SVEN_1040Single gene

DOOR ID: 3950606
SVEN_1040 View Structure
6 1668173-1668305 (+)cobalamin1668338-1669301 (+)SVEN_1494

Cobalamin biosynthesis protein CobD
SVEN_1494Single gene

DOOR ID: 3951060
SVEN_1494 View Structure
7 1969718-1969831 (+)TPP1971033-1971234 (+)SVEN_1767

Sulfur carrier protein ThiS
SVEN_1767Single gene

DOOR ID: 3951333
SVEN_1767 View Structure
8 2009878-2009994 (-)SAM-IV2008211-2009633 (-)SVEN_1803

Cysteine desulfurase
SVEN_1803Single gene

DOOR ID: 3951369
SVEN_1803 View Structure
9 2886672-2886741 (-)ykkC-III2886317-2886638 (-)SVEN_2647

SVEN_2647single gene

DOOR ID: 3952212
SVEN_2647 View Structure
10 2902313-2902386 (-)cobalamin2901284-2902253 (-)SVEN_2666

ABC transporter (Iron.B12.siderophore.hemin); periplasmic substrate-binding component
SVEN_2666Single gene

DOOR ID: 3952231
SVEN_2666 View Structure
11 3158926-3159099 (-)ydaO-yuaA3158199-3158922 (-)SVEN_2900

Putative secreted protein
SVEN_2900Single gene

DOOR ID: 3952465
SVEN_2900 View Structure
12 3826630-3826787 (-)cobalamin3822973-3826594 (-)SVEN_3516

CobN component of cobalt chelatase involved in B12 biosynthesis
SVEN_3516Single gene

DOOR ID: 3953081
SVEN_3516 View Structure
13 4022642-4022789 (+)TPP4024683-4025361 (-)SVEN_3708

Putative transmembrane protein
SVEN_3708Single gene

DOOR ID: 3953273
SVEN_3708 View Structure
14 4195346-4195492 (+)ydaO-yuaA4195503-4196643 (+)SVEN_3863

Putative peptidase
SVEN_3863Single gene

DOOR ID: 3953428
SVEN_3863 View Structure
15 4382758-4382904 (+)SAM4384248-4384527 (+)SVEN_4047

MoaD and or or ThiS families
SVEN_4047Single gene

DOOR ID: 3953612
SVEN_4047 View Structure
16 4865850-4865938 (+)ZMP-ZTP4866011-4867283 (+)SVEN_4511

Serine hydroxymethyltransferase (SHMT) (Serine methylase)
SVEN_4511Single gene

DOOR ID: 3954076
SVEN_4511 View Structure
17 5253748-5253917 (-)cobalamin5251235-5253614 (-)SVEN_4877

Ribonucleoside-diphosphate reductase
SVEN_4877Single gene

DOOR ID: 3954442
SVEN_4877 View Structure
18 5558472-5558571 (-)glycine5557187-5558312 (-)SVEN_5146

Aminomethyltransferase (0) (Glycine cleavage system T protein)
SVEN_5146Single gene

DOOR ID: 3954711
SVEN_5146 View Structure
19 5737565-5737675 (+)TPP5737757-5738852 (+)SVEN_5310

Thiamin ABC transporter; substrate-binding component
SVEN_5310Single gene

DOOR ID: 3954875
SVEN_5310 View Structure
20 5992967-5993131 (+)ydaO-yuaA5993144-5993915 (+)SVEN_5514

Putative peptidase
SVEN_5514Single gene

DOOR ID: 3955079
SVEN_5514 View Structure
21 6039320-6039465 (-)cobalamin6037623-6039177 (-)SVEN_5557

SVEN_5557Single gene

DOOR ID: 3955122
SVEN_5557 View Structure
22 6047723-6047862 (-)cobalamin6044794-6047614 (-)SVEN_5563

SVEN_5563Single gene

DOOR ID: 3955128
SVEN_5563 View Structure
23 6058708-6058888 (+)cobalamin6059117-6060617 (+)SVEN_5572

Methylmalonate-semialdehyde dehydrogenase (7)
SVEN_5572Single gene

DOOR ID: 3955137
SVEN_5572 View Structure
24 6069932-6070156 (-)cobalamin6067439-6069764 (-)SVEN_5580

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)
SVEN_5580Single gene

DOOR ID: 3955145
SVEN_5580 View Structure
25 7043426-7043580 (+)ydaO-yuaA7043584-7044577 (+)SVEN_6458

Putative peptidase
SVEN_6458Single gene

DOOR ID: 3956023
SVEN_6458 View Structure
26 7715328-7715413 (-)cobalamin7715040-7715268 (-)SVEN_7048

SVEN_7048Single gene

DOOR ID: 3956613
SVEN_7048 View Structure
27 7979933-7980041 (+)ZMP-ZTP7980069-7980924 (+)SVEN_7255

Bifunctional protein FolD [Includes: Methenyltetrahydrofolate cyclohydrolase ]
SVEN_7255Single gene

DOOR ID: 3956820
SVEN_7255 View Structure
28 8027037-8027115 (-)yybP-ykoY8026311-8026896 (-)SVEN_7296

Putative integral membrane protein
SVEN_7296Single gene

DOOR ID: 3956861
SVEN_7296 View Structure
29 8053640-8053823 (-)ydaO-yuaA8052726-8053635 (-)SVEN_7324

Phage tail length tape-measure protein
SVEN_7324Single gene

DOOR ID: 3956889
SVEN_7324 View Structure