RiboswitchDB

Genome: Emticicia oligotrophica DSM 17448 (NC_018748.1); Phylum: Bacteroidetes/Chlorobi group

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

2404532-2404630 (+)

TPP

2404757-2406923 (+)

Emtol_2326

TonB-dependent receptor

Single gene

DOOR ID: 3949040

Emtol_2326

2

2905288-2905378 (+)

TPP

2905481-2906207 (+)

Emtol_2724

Methyltransferase type 11

Operon

DOOR ID: 1305460

Emtol_2724,
Emtol_2725,
Emtol_2726,
Emtol_2727

3

4017302-4017418 (-)

SAM

4016713-4017190 (-)

Emtol_3660

Operon

DOOR ID: 1305646

Emtol_3659,
Emtol_3660

4

4671435-4671675 (+)

cobalamin

4671809-4673858 (+)

Emtol_4204

TonB-dependent receptor

Operon

DOOR ID: 1305777

Emtol_4204,
Emtol_4205

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