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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
437580-437688
(+)
glycine
439625-440936 (+)
BAST_0330
ABC transporter; extracellular substrate binding protein
BAST_0330
Operon
DOOR ID:
1166226
BAST_0330,
BAST_0332,
BAST_0333
View Structure
2
749412-749475
(-)
ykkC-III
749085-749403 (-)
BAST_0544
BAST_0544
single gene
DOOR ID:
3947469
BAST_0544
View Structure
3
1269778-1269936
(+)
ykoK
1270010-1271774 (+)
BAST_0974
ABC transporter; permease protein
BAST_0974
Operon
DOOR ID:
1166349
BAST_0974,
BAST_0975
View Structure
4
1273195-1273267
(+)
fluoride
1273357-1273795 (+)
BAST_0976
Putative fluoride ion transporter CrcB
BAST_0976
Operon
DOOR ID:
1166350
BAST_0976,
BAST_0977
View Structure
5
1384142-1384257
(-)
TPP
1380911-1383407 (-)
BAST_1058
ABC transporter; ATP binding protein (1)
BAST_1058
Operon
DOOR ID:
1166365
BAST_1058,
BAST_1059
View Structure
6
1416058-1416192
(+)
FMN
1416197-1416803 (+)
BAST_1082
Riboflavin transporter
BAST_1082
Operon
DOOR ID:
1166371
BAST_1082,
BAST_1083
View Structure
7
2067612-2067790
(+)
lysine
2067886-2069362 (+)
BAST_1628
Transporter; probably Lysine:H+ symporter
BAST_1628
Single gene
DOOR ID:
3947838
BAST_1628
View Structure
Genome:
Bifidobacterium asteroides PRL2011
(
NC_018720.1
);
Phylum:
Actinobacteria
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