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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
794933-795123
(-)
FMN
794338-794830 (-)
B5T_00752
6;7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (LS) (Lumazine synthase) (8)
B5T_00752
Single gene
DOOR ID:
3937554
B5T_00752
View Structure
2
1258816-1258863
(-)
mini-ykkC
1255200-1258794 (-)
uahA
B5T_01163
Operon
DOOR ID:
1302680
B5T_01163
(uahA)
,
B5T_01164,
B5T_01165,
B5T_01166,
B5T_01167,
B5T_01168
View Structure
3
1263020-1263119
(-)
ykkC-yxkD
1261918-1262965 (-)
B5T_01168
ABC transporter periplasmic binding protein; urea carboxylase region
B5T_01168
Operon
DOOR ID:
1302680
B5T_01163
(uahA)
,
B5T_01164,
B5T_01165,
B5T_01166,
B5T_01167,
B5T_01168
View Structure
4
1685645-1685702
(-)
mini-ykkC
1685310-1685625 (-)
sugE
B5T_01570
Single gene
DOOR ID:
3937841
B5T_01570
(sugE)
View Structure
5
4594942-4595203
(-)
cobalamin
4592906-4594784 (-)
B5T_04143
Putative vitamin B12 transporter BtuB; tonB-dependent receptor family
B5T_04143
Operon
DOOR ID:
1303307
B5T_04140,
B5T_04141,
B5T_04142,
B5T_04143
View Structure
6
4821096-4821281
(+)
yybP-ykoY
4821381-4821930 (+)
B5T_04357
B5T_04357
Operon
DOOR ID:
1303357
B5T_04357,
B5T_04358
View Structure
Genome:
Alcanivorax dieselolei B5
(
NC_018691.1
);
Phylum:
Gammaproteobacteria
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