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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
116952-117063
(-)
TPP
114766-116677 (-)
AMBAS45_00510
Phosphomethylpyrimidine synthase (7) (Hydroxymethylpyrimidine phosphate synthase) (HMP-P synthase) (HMP-phosphate synthase) (HMPP synthase) (Thiamine biosynthesis protein ThiC)
AMBAS45_00510
Operon
DOOR ID:
1301705
AMBAS45_00510,
AMBAS45_00505,
AMBAS45_00500,
AMBAS45_00495,
AMBAS45_00490
(thiG)
,
AMBAS45_00485
(thiH)
View Structure
2
710390-710642
(-)
cobalamin
708378-710331 (-)
AMBAS45_03110
TonB-dependent receptor
AMBAS45_03110
Single gene
DOOR ID:
3930583
AMBAS45_03110
View Structure
3
1267667-1267770
(+)
TPP
1267825-1269916 (+)
AMBAS45_05455
TonB-dependent receptor
AMBAS45_05455
Operon
DOOR ID:
1301880
AMBAS45_05455,
AMBAS45_05460,
AMBAS45_05465,
AMBAS45_05470
View Structure
Genome:
Alteromonas macleodii str. 'Balearic Sea AD45'
(
NC_018679.1
);
Phylum:
Gammaproteobacteria
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