RiboswitchDB

Genome: Alteromonas macleodii str. 'English Channel 673' (NC_018678.1); Phylum: Gammaproteobacteria

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

120123-120234 (-)

TPP

117937-119848 (-)

AMEC673_00520

Operon

DOOR ID: 1159851

AMEC673_00495 (thiH),
AMEC673_00500 (thiG),
AMEC673_00505,
AMEC673_00510,
AMEC673_00515,
AMEC673_00520

2

708085-708319 (-)

cobalamin

706073-708026 (-)

AMEC673_03070

Single gene

DOOR ID: 3929343

AMEC673_03070

3

1253384-1253487 (+)

TPP

1253542-1255633 (+)

AMEC673_05335

Operon

DOOR ID: 1160033

AMEC673_05335,
AMEC673_05340,
AMEC673_05345,
AMEC673_05350

4

3666621-3666747 (-)

yybP-ykoY

3666009-3666567 (-)

AMEC673_15710

Single gene

DOOR ID: 3930028

AMEC673_15710

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