RiboswitchDB

Genome: Alteromonas macleodii ATCC 27126 (NC_018632.1); Phylum: Gammaproteobacteria

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

107408-107519 (-)

TPP

105222-107133 (-)

MASE_00470

Operon

DOOR ID: 1154690

MASE_00445 (thiH),
MASE_00450 (thiG),
MASE_00455,
MASE_00460,
MASE_00465,
MASE_00470

2

648483-648717 (-)

cobalamin

646471-648424 (-)

MASE_02850

Single gene

DOOR ID: 3918220

MASE_02850

3

1228607-1228710 (+)

TPP

1228765-1230856 (+)

MASE_05260

Operon

DOOR ID: 1154866

MASE_05260,
MASE_05265,
MASE_05270,
MASE_05275

4

3590722-3590848 (-)

yybP-ykoY

3590110-3590668 (-)

MASE_15410

Single gene

DOOR ID: 3919219

MASE_15410

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