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S.No.
Riboswitch Location and Strand
Riboswitch class
Downstream gene location and Strand
Downstream gene name/gene product description
Locus_tag of downstream gene
Single gene/within operon (According to DOOR database)
Operon details (List of genes within operon and their Locus_tag)
Predicted Structure
1
405977-406072
(-)
purine
405044-405626 (-)
xpt
SPNA45_00404
Operon
DOOR ID:
1152559
SPNA45_00403
(pbuX)
,
SPNA45_00404
(xpt)
View Structure
2
1045084-1045172
(+)
TPP
1045386-1046055 (+)
SPNA45_01047
SPNA45_01047
Single gene
DOOR ID:
3914360
SPNA45_01047
View Structure
3
1048004-1048092
(+)
TPP
1048353-1048914 (+)
SPNA45_01050
SPNA45_01050
Single gene
DOOR ID:
3914361
SPNA45_01050
View Structure
4
1054695-1054793
(-)
TPP
1053819-1054611 (-)
thiD
SPNA45_01057
Single gene
DOOR ID:
3914363
SPNA45_01057
(thiD)
View Structure
5
1317093-1317189
(+)
preQ1-II
1318209-1319286 (+)
asd
SPNA45_01310
Operon
DOOR ID:
1152754
SPNA45_01310
(asd)
,
SPNA45_01311
(dapA)
View Structure
6
1612945-1613163
(-)
FMN
1612216-1612780 (-)
SPNA45_01586
SPNA45_01586
Operon
DOOR ID:
1152806
SPNA45_01585,
SPNA45_01586
View Structure
7
1670343-1670431
(-)
glycine
1668929-1670252 (-)
SPNA45_01645
SPNA45_01645
Single gene
DOOR ID:
3914565
SPNA45_01645
View Structure
8
2090346-2090448
(-)
TPP
2089984-2090275 (-)
SPNA45_02053
SPNA45_02053
Operon
DOOR ID:
1152907
SPNA45_02050,
SPNA45_02051,
SPNA45_02052,
SPNA45_02053
View Structure
Genome:
Streptococcus pneumoniae SPNA45
(
NC_018594.1
);
Phylum:
Firmicutes
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