Genome: Listeria monocytogenes SLCC5850 (NC_018592.1); Phylum: Firmicutes
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 133940-134042 (+)SAM134128-135703 (+)LMOSLCC5850_0131

LMOSLCC5850_0131Single gene

DOOR ID: 3912013
LMOSLCC5850_0131 View Structure
2 305345-305464 (-)SAM304412-305234 (-)LMOSLCC5850_0283

LMOSLCC5850_0283Operon

DOOR ID: 1377612
LMOSLCC5850_0279,
LMOSLCC5850_0280,
LMOSLCC5850_0281,
LMOSLCC5850_0282,
LMOSLCC5850_0283
View Structure
3 341409-341514 (+)TPP341600-342275 (+)LMOSLCC5850_0318

LMOSLCC5850_0318Operon

DOOR ID: 1377620
LMOSLCC5850_0318,
LMOSLCC5850_0319 (thiM),
LMOSLCC5850_0320 (thiD-1),
LMOSLCC5850_0321 (thiE)
View Structure
4 590717-590818 (-)purine589327-590623 (-)LMOSLCC5850_0566

LMOSLCC5850_0566Single gene

DOOR ID: 3912209
LMOSLCC5850_0566 View Structure
5 617508-617608 (-)SAM616121-617399 (-)cysD

LMOSLCC5850_0588Operon

DOOR ID: 1377666
LMOSLCC5850_0587 (metX),
LMOSLCC5850_0588 (cysD)
View Structure
6 738324-738518 (+)glmS738603-740409 (+)glmS

LMOSLCC5850_0729Single gene

DOOR ID: 3912267
LMOSLCC5850_0729 (glmS) View Structure
7 808384-808581 (-)lysine806833-808294 (-)lysP

LMOSLCC5850_0798Single gene

DOOR ID: 3912299
LMOSLCC5850_0798 (lysP) View Structure
8 863315-863412 (+)SAM863471-864611 (+)LMOSLCC5850_0843

LMOSLCC5850_0843Single gene

DOOR ID: 3912327
LMOSLCC5850_0843 View Structure
9 888482-888529 (+)PreQ1888534-889023 (+)LMOSLCC5850_0867

LMOSLCC5850_0867Single gene

DOOR ID: 3912336
LMOSLCC5850_0867 View Structure
10 1002789-1002892 (+)yybP-ykoY1002990-1003758 (+)LMOSLCC5850_0997

LMOSLCC5850_0997Single gene

DOOR ID: 3912366
LMOSLCC5850_0997 View Structure
11 1138287-1138477 (+)cobalamin1138627-1139512 (-)pocR

LMOSLCC5850_1139Single gene

DOOR ID: 3912412
LMOSLCC5850_1139 (pocR) View Structure
12 1156552-1156695 (+)cobalamin1157111-1158251 (+)LMOSLCC5850_1161

LMOSLCC5850_1161Single gene

DOOR ID: 3912414
LMOSLCC5850_1161 View Structure
13 1174955-1175132 (+)cobalamin1175293-1176652 (+)cobB

LMOSLCC5850_1181Operon

DOOR ID: 1377786
LMOSLCC5850_1181 (cobB),
LMOSLCC5850_1182 (cobD),
LMOSLCC5850_1183 (cobH),
LMOSLCC5850_1184 (cbiD),
LMOSLCC5850_1185 (cbiE),
LMOSLCC5850_1186 (cbiT),
LMOSLCC5850_1187 (cbiF)
View Structure
14 1374855-1374946 (+)glycine1375029-1376118 (+)gcvT

LMOSLCC5850_1407Operon

DOOR ID: 1377833
LMOSLCC5850_1407 (gcvT),
LMOSLCC5850_1408 (gcvP1),
LMOSLCC5850_1409 (gcvP2)
View Structure
15 1463178-1463288 (-)TPP1462548-1463109 (-)LMOSLCC5850_1488

LMOSLCC5850_1488Single gene

DOOR ID: 3912499
LMOSLCC5850_1488 View Structure
16 1718220-1718328 (-)SAM1716912-1718112 (-)metK

LMOSLCC5850_1727Single gene

DOOR ID: 3912565
LMOSLCC5850_1727 (metK) View Structure
17 1741169-1741275 (-)SAM1738764-1741062 (-)metE

LMOSLCC5850_1744Operon

DOOR ID: 1377913
LMOSLCC5850_1741,
LMOSLCC5850_1742 (metC-1),
LMOSLCC5850_1743 (metC-2),
LMOSLCC5850_1744 (metE)
View Structure
18 1957982-1958082 (-)purine1957321-1957900 (-)xpt

LMOSLCC5850_1947Operon

DOOR ID: 1377955
LMOSLCC5850_1946 (pbuX),
LMOSLCC5850_1947 (xpt)
View Structure
19 2019648-2019770 (-)FMN2018846-2019458 (-)LMOSLCC5850_2006

LMOSLCC5850_2006Single gene

DOOR ID: 3912644
LMOSLCC5850_2006 View Structure
20 2449521-2449639 (-)SAM2448408-2449431 (-)metN

LMOSLCC5850_2421Operon

DOOR ID: 1378058
LMOSLCC5850_2419,
LMOSLCC5850_2420 (metI),
LMOSLCC5850_2421 (metN)
View Structure
21 2732925-2733091 (-)ykoK2730069-2732640 (-)mgtA

LMOSLCC5850_2702Operon

DOOR ID: 1378122
LMOSLCC5850_2700,
LMOSLCC5850_2701 (ftsW),
LMOSLCC5850_2702 (mgtA)
View Structure