Genome: Arthrobacter sp. Rue61a (NC_018531.1); Phylum: Actinobacteria
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 399127-399318 (+)ydaO-yuaA399321-400116 (+)ARUE_c03810

ARUE_c03810Single gene

DOOR ID: 3901620		ARUE_c03810 View Structure
2 789866-790050 (-)ydaO-yuaA789000-789864 (-)ARUE_c07520

ARUE_c07520Single gene

DOOR ID: 3901747		ARUE_c07520 View Structure
3 838882-838980 (+)glycine839131-840598 (+)cycA1

D-serine/D-alanine/glycine transporter CycA		ARUE_c07930Single gene

DOOR ID: 3901763		ARUE_c07930 (cycA1) View Structure
4 998224-998321 (+)glycine998499-1001346 (+)gcvP1

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))		ARUE_c09380Operon

DOOR ID: 1146376		ARUE_c09380 (gcvP1),
ARUE_c09390 (gcvT1),
ARUE_c09400 (gcvH1)		 View Structure
5 1033520-1033760 (+)ydaO-yuaA1033764-1034601 (+)ARUE_c09710

M23 peptidase domain protein		ARUE_c09710Single gene

DOOR ID: 3901827		ARUE_c09710 View Structure
6 1034741-1034908 (+)ydaO-yuaA1034908-1035139 (-)ARUE_c09720

ARUE_c09720Single gene

DOOR ID: 3901828		ARUE_c09720 View Structure
7 1073542-1073661 (-)SAM-IV1073195-1073525 (-)ARUE_c10080

ARUE_c10080Single gene

DOOR ID: 3901840		ARUE_c10080 View Structure
8 1249562-1249647 (+)ZMP-ZTP1249763-1251056 (+)glyA1

Serine hydroxymethyltransferase (SHMT) (Serine methylase) 		ARUE_c11630Single gene

DOOR ID: 3901897		ARUE_c11630 (glyA1) View Structure
9 1517408-1517524 (+)SAM-IV1517539-1518661 (+)metX

Homoserine O-acetyltransferase (HAT) (1) (Homoserine transacetylase) (HTA)		ARUE_c13900Single gene

DOOR ID: 3901962		ARUE_c13900 (metX) View Structure
10 1885445-1885599 (+)FMN1886389-1887511 (+)ribD4

Riboflavin biosynthesis protein RibD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (DRAP deaminase) (93) (HTP reductase)]		ARUE_c17280Operon

DOOR ID: 1146547		ARUE_c17270,
ARUE_c17280 (ribD4),
ARUE_c17290 (ribE),
ARUE_c17300 (ribBA1),
ARUE_c17310 (ribBA2),
ARUE_c17320 (ribH),
ARUE_c17330 (hisE)		 View Structure
11 2740300-2740350 (-)glutamine2738642-2740145 (-)ARUE_c24790

FAD-and Rieske-type 2Fe2S-cluster-containing oxidoreductase		ARUE_c24790Single gene

DOOR ID: 3902282		ARUE_c24790 View Structure
12 2783083-2783181 (-)TPP2780859-2781180 (-)rplU

50S ribosomal protein L21		ARUE_c25220Operon

DOOR ID: 1146709		ARUE_c25210 (rpmA),
ARUE_c25220 (rplU)		 View Structure
13 2869582-2869689 (+)TPP2871535-2872258 (-)thiC

ARUE_c26120Single gene

DOOR ID: 3902325		ARUE_c26120 View Structure
14 3083702-3083815 (+)SAM-IV3083846-3085256 (+)csd2

Putative cysteine desulfurase Csd 		ARUE_c28030Operon

DOOR ID: 1146772		ARUE_c28030 (csd2),
ARUE_c28040,
ARUE_c28050		 View Structure
15 3128109-3128202 (-)SAH3126166-3126655 (-)ARUE_c28370

ARUE_c28370Single gene

DOOR ID: 3902380		ARUE_c28370 View Structure
16 3223725-3223843 (-)TPP3222230-3222467 (-)thiS

Thiamine biosynthesis protein ThiS		ARUE_c29160Operon

DOOR ID: 1146797		ARUE_c29140,
ARUE_c29150 (thiG),
ARUE_c29160 (thiS),
ARUE_c29170		 View Structure
17 3269165-3269237 (+)SAH3269484-3270570 (-)ispH

4-hydroxy-3-methylbut-2-enyl diphosphate reductase (HMBPP reductase) 		ARUE_c29620Operon

DOOR ID: 1146809		ARUE_c29620 (ispH),
ARUE_c29630		 View Structure
18 4036880-4036945 (+)ykkC-III4036954-4037269 (+)ARUE_c36700

ARUE_c36700operon

DOOR ID: 1146979		ARUE_c36690,
ARUE_c36700,
ARUE_c36710		 View Structure
19 4165606-4165717 (+)SAM-IV4165730-4165997 (+)ARUE_c37970

ARUE_c37970Operon

DOOR ID: 1147010		ARUE_c37970,
ARUE_c37980,
ARUE_c37990,
ARUE_c38000		 View Structure
20 4178035-4178171 (-)TPP4177336-4177957 (-)ykoD

Putative integral membrane protein		ARUE_c38080Operon

DOOR ID: 1147012		ARUE_c38060,
ARUE_c38070 (ykoD),
ARUE_c38080		 View Structure
21 4402825-4402970 (+)ydaO-yuaA4402972-4404298 (+)ARUE_c40100

ARUE_c40100Single gene

DOOR ID: 3902659		ARUE_c40100 View Structure
22 4541025-4541123 (-)glycine4538024-4540889 (-)gcvP2

Glycine dehydrogenase (decarboxylating) (Glycine cleavage system P-protein) (Glycine decarboxylase) (Glycine dehydrogenase (aminomethyl-transferring))		ARUE_c41470Operon

DOOR ID: 1147086		ARUE_c41440 (glyA3),
ARUE_c41450 (gcvH3),
ARUE_c41460 (gcvT2),
ARUE_c41470 (gcvP2)		 View Structure